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  5. Pp1s115_190V6

Pp1s115_190V6


Description : (1-4)-beta-mannan endohydrolase (mannan endo- -beta-mannosidase)


Gene families : OG_42_0000309 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000309_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Physcomitrella release: Pp1s115_190V6
Cluster HCCA clusters: Cluster_4

Target Alias Description ECC score Gene Family Method Actions
Bradi2g45790 No alias Glycosyl hydrolase superfamily protein 0.04 Orthogroups_2024-Update
Glyma.06G030500 No alias Glycosyl hydrolase superfamily protein 0.03 Orthogroups_2024-Update
HORVU5Hr1G115310.4 No alias endo-beta-1,4-mannanase 0.02 Orthogroups_2024-Update
LOC_Os01g47400 No alias OsMan01 - Endo-Beta-Mannanase, expressed 0.02 Orthogroups_2024-Update
MA_894609g0010 No alias (at5g66460 : 457.0) Glycosyl hydrolase superfamily... 0.05 Orthogroups_2024-Update
MA_955078g0010 No alias (at5g66460 : 462.0) Glycosyl hydrolase superfamily... 0.03 Orthogroups_2024-Update
PSME_00009478-RA No alias (at5g01930 : 536.0) Glycosyl hydrolase superfamily... 0.03 Orthogroups_2024-Update
PSME_00033748-RA No alias (at5g66460 : 455.0) Glycosyl hydrolase superfamily... 0.02 Orthogroups_2024-Update
PSME_00042038-RA No alias (at5g01930 : 509.0) Glycosyl hydrolase superfamily... 0.03 Orthogroups_2024-Update
PSME_00045003-RA No alias (at5g66460 : 453.0) Glycosyl hydrolase superfamily... 0.02 Orthogroups_2024-Update
Potri.006G109900 No alias Glycosyl hydrolase superfamily protein 0.03 Orthogroups_2024-Update
Potri.007G022000 No alias Glycosyl hydrolase superfamily protein 0.02 Orthogroups_2024-Update
Pp1s23_181V6 No alias contains ESTs AU093960(E1432),C72325(E1432) [Oryza... 0.04 Orthogroups_2024-Update
Solyc07g053920 No alias Mannan endo-1,4-beta-mannosidase 2 (AHRD V3.3 *** MAN2_ARATH) 0.02 Orthogroups_2024-Update
Sopen02g029660 No alias Cellulase (glycosyl hydrolase family 5) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEA InterProScan predictions
BP GO:0005975 carbohydrate metabolic process IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0004568 chitinase activity IEP Predicted GO
MF GO:0004674 protein serine/threonine kinase activity IEP Predicted GO
MF GO:0004683 calmodulin-dependent protein kinase activity IEP Predicted GO
MF GO:0005516 calmodulin binding IEP Predicted GO
CC GO:0005576 extracellular region IEP Predicted GO
CC GO:0005618 cell wall IEP Predicted GO
BP GO:0006022 aminoglycan metabolic process IEP Predicted GO
BP GO:0006026 aminoglycan catabolic process IEP Predicted GO
BP GO:0006030 chitin metabolic process IEP Predicted GO
BP GO:0006032 chitin catabolic process IEP Predicted GO
BP GO:0006040 amino sugar metabolic process IEP Predicted GO
BP GO:0008037 cell recognition IEP Predicted GO
MF GO:0008061 chitin binding IEP Predicted GO
MF GO:0008378 galactosyltransferase activity IEP Predicted GO
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Predicted GO
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Predicted GO
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Predicted GO
BP GO:0016998 cell wall macromolecule catabolic process IEP Predicted GO
BP GO:0022414 reproductive process IEP Predicted GO
MF GO:0030246 carbohydrate binding IEP Predicted GO
CC GO:0030312 external encapsulating structure IEP Predicted GO
BP GO:0042737 drug catabolic process IEP Predicted GO
BP GO:0044036 cell wall macromolecule metabolic process IEP Predicted GO
BP GO:0046348 amino sugar catabolic process IEP Predicted GO
CC GO:0048046 apoplast IEP Predicted GO
BP GO:0048544 recognition of pollen IEP Predicted GO
BP GO:1901071 glucosamine-containing compound metabolic process IEP Predicted GO
BP GO:1901072 glucosamine-containing compound catabolic process IEP Predicted GO
BP GO:1901136 carbohydrate derivative catabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR001547 Glyco_hydro_5 142 419
No external refs found!