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  5. Pp1s116_27V6

Pp1s116_27V6


Description : sigma factor sigb regulation protein


Gene families : OG_42_0000569 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000569_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Physcomitrella release: Pp1s116_27V6
Cluster HCCA clusters: Cluster_41

Target Alias Description ECC score Gene Family Method Actions
Bradi1g70930 No alias alpha/beta-Hydrolases superfamily protein 0.02 Orthogroups_2024-Update
Brara.G00622.1 No alias strigolactone signal transducer *(DLK2) 0.03 Orthogroups_2024-Update
GRMZM2G163578 No alias alpha/beta-Hydrolases superfamily protein 0.02 Orthogroups_2024-Update
Glyma.01G191200 No alias alpha/beta-Hydrolases superfamily protein 0.02 Orthogroups_2024-Update
LOC_Os03g10620 No alias hydrolase, alpha/beta fold family domain containing... 0.02 Orthogroups_2024-Update
LOC_Os05g51240 No alias hydrolase, alpha/beta fold family domain containing... 0.02 Orthogroups_2024-Update
MA_10427409g0020 No alias (at3g03990 : 260.0) alpha/beta-Hydrolases superfamily... 0.02 Orthogroups_2024-Update
MA_181954g0010 No alias (at4g37470 : 232.0) alpha/beta-Hydrolases superfamily... 0.02 Orthogroups_2024-Update
MA_6909466g0010 No alias (at3g03990 : 152.0) alpha/beta-Hydrolases superfamily... 0.02 Orthogroups_2024-Update
MA_77236g0010 No alias (at3g03990 : 296.0) alpha/beta-Hydrolases superfamily... 0.02 Orthogroups_2024-Update
PSME_00055815-RA No alias (at3g03990 : 338.0) alpha/beta-Hydrolases superfamily... 0.02 Orthogroups_2024-Update
Pp1s150_116V6 No alias sigma factor sigb regulation protein 0.04 Orthogroups_2024-Update
Seita.9G500200.1 No alias strigolactone receptor protein *(D14) 0.02 Orthogroups_2024-Update
Sobic.001G330000.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sopen04g031460 No alias Alpha/beta hydrolase family 0.02 Orthogroups_2024-Update
Sopen05g015210 No alias Alpha/beta hydrolase family 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000155 phosphorelay sensor kinase activity IEP Predicted GO
MF GO:0003674 molecular_function IEP Predicted GO
MF GO:0003677 DNA binding IEP Predicted GO
MF GO:0003700 DNA-binding transcription factor activity IEP Predicted GO
MF GO:0003779 actin binding IEP Predicted GO
MF GO:0004332 fructose-bisphosphate aldolase activity IEP Predicted GO
MF GO:0004435 phosphatidylinositol phospholipase C activity IEP Predicted GO
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Predicted GO
MF GO:0004620 phospholipase activity IEP Predicted GO
MF GO:0004629 phospholipase C activity IEP Predicted GO
MF GO:0004673 protein histidine kinase activity IEP Predicted GO
MF GO:0005534 galactose binding IEP Predicted GO
BP GO:0005975 carbohydrate metabolic process IEP Predicted GO
BP GO:0006355 regulation of transcription, DNA-templated IEP Predicted GO
BP GO:0006536 glutamate metabolic process IEP Predicted GO
BP GO:0006537 glutamate biosynthetic process IEP Predicted GO
BP GO:0007165 signal transduction IEP Predicted GO
MF GO:0008289 lipid binding IEP Predicted GO
MF GO:0008483 transaminase activity IEP Predicted GO
BP GO:0009314 response to radiation IEP Predicted GO
BP GO:0009416 response to light stimulus IEP Predicted GO
BP GO:0009581 detection of external stimulus IEP Predicted GO
BP GO:0009582 detection of abiotic stimulus IEP Predicted GO
BP GO:0009583 detection of light stimulus IEP Predicted GO
BP GO:0009584 detection of visible light IEP Predicted GO
BP GO:0009605 response to external stimulus IEP Predicted GO
BP GO:0009628 response to abiotic stimulus IEP Predicted GO
BP GO:0009889 regulation of biosynthetic process IEP Predicted GO
BP GO:0010468 regulation of gene expression IEP Predicted GO
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Predicted GO
MF GO:0015930 glutamate synthase activity IEP Predicted GO
MF GO:0016298 lipase activity IEP Predicted GO
MF GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors IEP Predicted GO
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP Predicted GO
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP Predicted GO
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Predicted GO
MF GO:0016832 aldehyde-lyase activity IEP Predicted GO
BP GO:0018298 protein-chromophore linkage IEP Predicted GO
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Predicted GO
BP GO:0019222 regulation of metabolic process IEP Predicted GO
BP GO:0019321 pentose metabolic process IEP Predicted GO
BP GO:0019566 arabinose metabolic process IEP Predicted GO
BP GO:0031323 regulation of cellular metabolic process IEP Predicted GO
BP GO:0031326 regulation of cellular biosynthetic process IEP Predicted GO
MF GO:0043565 sequence-specific DNA binding IEP Predicted GO
BP GO:0043648 dicarboxylic acid metabolic process IEP Predicted GO
BP GO:0043650 dicarboxylic acid biosynthetic process IEP Predicted GO
BP GO:0046373 L-arabinose metabolic process IEP Predicted GO
MF GO:0046556 alpha-L-arabinofuranosidase activity IEP Predicted GO
MF GO:0046912 transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer IEP Predicted GO
MF GO:0048029 monosaccharide binding IEP Predicted GO
BP GO:0050789 regulation of biological process IEP Predicted GO
BP GO:0050794 regulation of cellular process IEP Predicted GO
BP GO:0050896 response to stimulus IEP Predicted GO
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Predicted GO
BP GO:0051252 regulation of RNA metabolic process IEP Predicted GO
BP GO:0051606 detection of stimulus IEP Predicted GO
BP GO:0060255 regulation of macromolecule metabolic process IEP Predicted GO
BP GO:0065007 biological regulation IEP Predicted GO
BP GO:0080090 regulation of primary metabolic process IEP Predicted GO
MF GO:0140110 transcription regulator activity IEP Predicted GO
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Predicted GO
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Predicted GO
BP GO:2001141 regulation of RNA biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR000073 AB_hydrolase_1 21 176
No external refs found!