1. Home
  2. Species
  3. Physcomitrella patens
  4. Sequence
  5. Pp1s116_83V6

Pp1s116_83V6


No description available


Gene families : OG_42_0004785 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0004785_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Physcomitrella release: Pp1s116_83V6
Cluster HCCA clusters: Cluster_178

Target Alias Description ECC score Gene Family Method Actions
MA_175476g0010 No alias (at1g20920 : 1078.0) P-loop containing nucleoside... 0.02 Orthogroups_2024-Update
PSME_00013357-RA No alias (at1g20920 : 1027.0) P-loop containing nucleoside... 0.03 Orthogroups_2024-Update
Potri.005G257400 No alias P-loop containing nucleoside triphosphate hydrolases... 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA InterProScan predictions
MF GO:0005524 ATP binding IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source
BP GO:0006364 rRNA processing IEP Predicted GO
BP GO:0006508 proteolysis IEP Predicted GO
BP GO:0006904 vesicle docking involved in exocytosis IEP Predicted GO
BP GO:0008037 cell recognition IEP Predicted GO
MF GO:0008233 peptidase activity IEP Predicted GO
MF GO:0008238 exopeptidase activity IEP Predicted GO
BP GO:0016072 rRNA metabolic process IEP Predicted GO
BP GO:0016579 protein deubiquitination IEP Predicted GO
MF GO:0016740 transferase activity IEP Predicted GO
MF GO:0019783 ubiquitin-like protein-specific protease activity IEP Predicted GO
BP GO:0022406 membrane docking IEP Predicted GO
BP GO:0022414 reproductive process IEP Predicted GO
CC GO:0030684 preribosome IEP Predicted GO
CC GO:0030688 preribosome, small subunit precursor IEP Predicted GO
MF GO:0036459 thiol-dependent ubiquitinyl hydrolase activity IEP Predicted GO
BP GO:0048278 vesicle docking IEP Predicted GO
BP GO:0048544 recognition of pollen IEP Predicted GO
BP GO:0051640 organelle localization IEP Predicted GO
MF GO:0070008 serine-type exopeptidase activity IEP Predicted GO
MF GO:0070011 peptidase activity, acting on L-amino acid peptides IEP Predicted GO
BP GO:0070646 protein modification by small protein removal IEP Predicted GO
MF GO:0101005 ubiquitinyl hydrolase activity IEP Predicted GO
BP GO:0140029 exocytic process IEP Predicted GO
BP GO:0140056 organelle localization by membrane tethering IEP Predicted GO
MF GO:0140096 catalytic activity, acting on a protein IEP Predicted GO
InterPro domains Description Start Stop
IPR011545 DEAD/DEAH_box_helicase_dom 180 323
IPR001650 Helicase_C 327 432
No external refs found!