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  5. Pp1s118_231V6

Pp1s118_231V6


Description : MAA21.150; 9-cis-epoxycarotenoid dioxygenase / neoxanthin cleavage enzyme / NCED1 / carotenoid cleavage dioxygenase 1 (CCD1) [Arabidopsis thaliana]


Gene families : OG_42_0000424 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000424_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Physcomitrella release: Pp1s118_231V6
Cluster HCCA clusters: Cluster_46

Target Alias Description ECC score Gene Family Method Actions
A4A49_18325 No alias carotenoid 9,10(9',10')-cleavage dioxygenase 1 0.02 Orthogroups_2024-Update
A4A49_34874 No alias putative carotenoid cleavage dioxygenase 4, chloroplastic 0.02 Orthogroups_2024-Update
At3g63520 No alias Carotenoid 9,10(9',10')-cleavage dioxygenase 1... 0.03 Orthogroups_2024-Update
At4g19170 No alias Probable carotenoid cleavage dioxygenase 4,... 0.02 Orthogroups_2024-Update
Bradi4g00330 No alias carotenoid cleavage dioxygenase 1 0.02 Orthogroups_2024-Update
Bradi4g00335 No alias carotenoid cleavage dioxygenase 1 0.02 Orthogroups_2024-Update
Brara.A01020.1 No alias carotenoid cleavage dioxygenase *(CCD4) & EC_1.13... 0.02 Orthogroups_2024-Update
Brara.A03189.1 No alias EC_1.13 oxidoreductase acting on single donor with... 0.02 Orthogroups_2024-Update
Brara.H01021.1 No alias carotenoid cleavage dioxygenase *(CCD4) & EC_1.13... 0.02 Orthogroups_2024-Update
Brara.I04484.1 No alias carotenoid cleavage dioxygenase *(CCD1) & EC_1.13... 0.02 Orthogroups_2024-Update
GRMZM2G057243 No alias carotenoid cleavage dioxygenase 1 0.02 Orthogroups_2024-Update
Glyma.05G140900 No alias nine-cis-epoxycarotenoid dioxygenase 5 0.02 Orthogroups_2024-Update
Glyma.12G236650 No alias carotenoid cleavage dioxygenase 1 0.03 Orthogroups_2024-Update
Glyma.12G236700 No alias carotenoid cleavage dioxygenase 1 0.02 Orthogroups_2024-Update
HORVU5Hr1G000320.2 No alias carotenoid cleavage dioxygenase *(CCD1) & EC_1.13... 0.02 Orthogroups_2024-Update
HORVU6Hr1G068720.4 No alias carotenoid cleavage dioxygenase *(CCD4) & EC_1.13... 0.02 Orthogroups_2024-Update
MA_10428505g0010 No alias (at3g14440 : 285.0) Encodes ... 0.02 Orthogroups_2024-Update
MA_10434448g0010 No alias (at3g14440 : 592.0) Encodes ... 0.03 Orthogroups_2024-Update
Mp7g12990.1 No alias carotenoid cleavage dioxygenase (CCD1) 0.04 Orthogroups_2024-Update
Pp1s12_317V6 No alias carotenoid cleavage dioxygenase 1 0.03 Orthogroups_2024-Update
Seita.3G408300.1 No alias carotenoid cleavage dioxygenase *(CCD1) & EC_1.13... 0.02 Orthogroups_2024-Update
Sobic.001G509200.1 No alias carotenoid cleavage dioxygenase *(CCD1) & EC_1.13... 0.02 Orthogroups_2024-Update
Solyc07g056570 No alias notabilis 0.02 Orthogroups_2024-Update
Sopen08g024140 No alias Retinal pigment epithelial membrane protein 0.02 Orthogroups_2024-Update
evm.model.tig00001071.14 No alias (at3g63520 : 102.0) Encodes a protein with... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEA InterProScan predictions
BP GO:0055114 oxidation-reduction process IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0001871 pattern binding IEP Predicted GO
MF GO:0004602 glutathione peroxidase activity IEP Predicted GO
MF GO:0004721 phosphoprotein phosphatase activity IEP Predicted GO
MF GO:0004866 endopeptidase inhibitor activity IEP Predicted GO
MF GO:0004869 cysteine-type endopeptidase inhibitor activity IEP Predicted GO
MF GO:0008138 protein tyrosine/serine/threonine phosphatase activity IEP Predicted GO
BP GO:0015969 guanosine tetraphosphate metabolic process IEP Predicted GO
CC GO:0016020 membrane IEP Predicted GO
BP GO:0016311 dephosphorylation IEP Predicted GO
BP GO:0016458 gene silencing IEP Predicted GO
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Predicted GO
MF GO:0016791 phosphatase activity IEP Predicted GO
MF GO:0016868 intramolecular transferase activity, phosphotransferases IEP Predicted GO
BP GO:0019725 cellular homeostasis IEP Predicted GO
MF GO:0030247 polysaccharide binding IEP Predicted GO
MF GO:0030414 peptidase inhibitor activity IEP Predicted GO
BP GO:0031047 gene silencing by RNA IEP Predicted GO
BP GO:0033865 nucleoside bisphosphate metabolic process IEP Predicted GO
BP GO:0033875 ribonucleoside bisphosphate metabolic process IEP Predicted GO
BP GO:0034032 purine nucleoside bisphosphate metabolic process IEP Predicted GO
BP GO:0034035 purine ribonucleoside bisphosphate metabolic process IEP Predicted GO
MF GO:0042578 phosphoric ester hydrolase activity IEP Predicted GO
BP GO:0042592 homeostatic process IEP Predicted GO
BP GO:0045454 cell redox homeostasis IEP Predicted GO
MF GO:0061134 peptidase regulator activity IEP Predicted GO
MF GO:0061135 endopeptidase regulator activity IEP Predicted GO
BP GO:1901068 guanosine-containing compound metabolic process IEP Predicted GO
MF GO:2001070 starch binding IEP Predicted GO
InterPro domains Description Start Stop
IPR004294 Carotenoid_Oase 332 603
IPR004294 Carotenoid_Oase 156 331
No external refs found!