1. Home
  2. Species
  3. Solanum lycopersicum
  4. Sequence
  5. Solyc11g008300

Solyc11g008300


Description : LOW QUALITY:F-box family protein, putative (AHRD V3.3 *-* S1RTT0_THECC)


Gene families : OG_42_0000102 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000102_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc11g008300
Cluster HCCA clusters: Cluster_61

Target Alias Description ECC score Gene Family Method Actions
Glyma.05G071700 No alias F-box family protein 0.01 Orthogroups_2024-Update
Glyma.15G101700 No alias F-box and associated interaction domains-containing protein 0.03 Orthogroups_2024-Update
Potri.017G058900 No alias F-box family protein 0.01 Orthogroups_2024-Update
Solyc07g052580 No alias LOW QUALITY:F-box protein, putative (AHRD V3.3 *** Q6L3P8_SOLDE) 0.04 Orthogroups_2024-Update
Sopen03g024680 No alias hypothetical protein 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source
CC GO:0009521 photosystem IEP Predicted GO
CC GO:0009522 photosystem I IEP Predicted GO
CC GO:0009579 thylakoid IEP Predicted GO
BP GO:0015979 photosynthesis IEP Predicted GO
CC GO:0044436 thylakoid part IEP Predicted GO
CC GO:0098796 membrane protein complex IEP Predicted GO
InterPro domains Description Start Stop
IPR001810 F-box_dom 75 115
No external refs found!