1. Home
  2. Species
  3. Physcomitrella patens
  4. Sequence
  5. Pp1s11_117V6

Pp1s11_117V6


Description : MQN23.1; expressed protein [Arabidopsis thaliana]


Gene families : OG_42_0003000 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0003000_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Physcomitrella release: Pp1s11_117V6
Cluster HCCA clusters: Cluster_202

Target Alias Description ECC score Gene Family Method Actions
HORVU6Hr1G077660.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Seita.1G326800.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Seita.4G089200.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.010G087300.1 No alias Unknown function 0.02 Orthogroups_2024-Update
evm.model.tig00000842.17 No alias (at5g65290 : 97.1) LMBR1-like membrane protein;... 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEP Predicted GO
MF GO:0003916 DNA topoisomerase activity IEP Predicted GO
MF GO:0003917 DNA topoisomerase type I activity IEP Predicted GO
MF GO:0004298 threonine-type endopeptidase activity IEP Predicted GO
CC GO:0005694 chromosome IEP Predicted GO
CC GO:0005839 proteasome core complex IEP Predicted GO
BP GO:0006265 DNA topological change IEP Predicted GO
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP Predicted GO
CC GO:0019773 proteasome core complex, alpha-subunit complex IEP Predicted GO
BP GO:0019941 modification-dependent protein catabolic process IEP Predicted GO
BP GO:0043632 modification-dependent macromolecule catabolic process IEP Predicted GO
BP GO:0051276 chromosome organization IEP Predicted GO
MF GO:0070003 threonine-type peptidase activity IEP Predicted GO
BP GO:0071103 DNA conformation change IEP Predicted GO
InterPro domains Description Start Stop
IPR006876 LMBR1-like_membr_prot 19 492
No external refs found!