1. Home
  2. Species
  3. Physcomitrella patens
  4. Sequence
  5. Pp1s120_74V6

Pp1s120_74V6


Description : contains ESTs AU056303(S20457),AU056302(S20457) [Oryza sativa (japonica cultivar-group)]


Gene families : OG_42_0004516 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0004516_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Physcomitrella release: Pp1s120_74V6
Cluster HCCA clusters: Cluster_41

Target Alias Description ECC score Gene Family Method Actions
At2g40000 No alias Nematode resistance protein-like HSPRO2... 0.04 Orthogroups_2024-Update
Brara.C02045.1 No alias Unknown function 0.08 Orthogroups_2024-Update
Brara.D02425.1 No alias Unknown function 0.07 Orthogroups_2024-Update
Brara.E00580.1 No alias Unknown function 0.05 Orthogroups_2024-Update
GRMZM2G003682 No alias ortholog of sugar beet HS1 PRO-1 2 0.02 Orthogroups_2024-Update
MA_98236g0010 No alias (at2g40000 : 241.0) ortholog of sugar beet HS1 PRO-1 2... 0.03 Orthogroups_2024-Update
PSME_00020623-RA No alias (at2g40000 : 194.0) ortholog of sugar beet HS1 PRO-1 2... 0.05 Orthogroups_2024-Update
PSME_00038280-RA No alias (at2g40000 : 93.6) ortholog of sugar beet HS1 PRO-1 2... 0.02 Orthogroups_2024-Update
Sobic.003G361100.1 No alias Unknown function 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0006952 defense response IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Predicted GO
MF GO:0003779 actin binding IEP Predicted GO
MF GO:0003993 acid phosphatase activity IEP Predicted GO
MF GO:0004392 heme oxygenase (decyclizing) activity IEP Predicted GO
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Predicted GO
MF GO:0004555 alpha,alpha-trehalase activity IEP Predicted GO
MF GO:0004559 alpha-mannosidase activity IEP Predicted GO
MF GO:0004672 protein kinase activity IEP Predicted GO
BP GO:0005975 carbohydrate metabolic process IEP Predicted GO
BP GO:0005984 disaccharide metabolic process IEP Predicted GO
BP GO:0005991 trehalose metabolic process IEP Predicted GO
BP GO:0005992 trehalose biosynthetic process IEP Predicted GO
BP GO:0005996 monosaccharide metabolic process IEP Predicted GO
BP GO:0006013 mannose metabolic process IEP Predicted GO
BP GO:0006468 protein phosphorylation IEP Predicted GO
BP GO:0006720 isoprenoid metabolic process IEP Predicted GO
BP GO:0006721 terpenoid metabolic process IEP Predicted GO
BP GO:0006778 porphyrin-containing compound metabolic process IEP Predicted GO
BP GO:0006788 heme oxidation IEP Predicted GO
BP GO:0008299 isoprenoid biosynthetic process IEP Predicted GO
MF GO:0008661 1-deoxy-D-xylulose-5-phosphate synthase activity IEP Predicted GO
BP GO:0009311 oligosaccharide metabolic process IEP Predicted GO
MF GO:0015923 mannosidase activity IEP Predicted GO
MF GO:0015927 trehalase activity IEP Predicted GO
BP GO:0016114 terpenoid biosynthetic process IEP Predicted GO
MF GO:0016301 kinase activity IEP Predicted GO
BP GO:0016310 phosphorylation IEP Predicted GO
MF GO:0016624 oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor IEP Predicted GO
MF GO:0016744 transferase activity, transferring aldehyde or ketonic groups IEP Predicted GO
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Predicted GO
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Predicted GO
BP GO:0019321 pentose metabolic process IEP Predicted GO
BP GO:0019566 arabinose metabolic process IEP Predicted GO
BP GO:0042168 heme metabolic process IEP Predicted GO
BP GO:0042440 pigment metabolic process IEP Predicted GO
BP GO:0044238 primary metabolic process IEP Predicted GO
BP GO:0044262 cellular carbohydrate metabolic process IEP Predicted GO
BP GO:0046373 L-arabinose metabolic process IEP Predicted GO
MF GO:0046556 alpha-L-arabinofuranosidase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR009869 HSPRO1_N 55 198
IPR009743 Hs1pro-1_C 201 473
No external refs found!