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  5. Pp1s121_28V6

Pp1s121_28V6


Description : ubiquitin-protein ligase zinc ion binding protein


Gene families : OG_42_0001976 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001976_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood Physcomitrella release: Pp1s121_28V6
Cluster HCCA clusters: Cluster_72

Target Alias Description ECC score Gene Family Method Actions
At5g48655 No alias Putative RING zinc finger [Source:UniProtKB/TrEMBL;Acc:Q8GS41] 0.02 Orthogroups_2024-Update
Brara.F02992.1 No alias E3 ubiquitin ligase *(STUBL1/3) 0.03 Orthogroups_2024-Update
HORVU3Hr1G093960.1 No alias E3 ubiquitin ligase *(STUBL1/3) 0.03 Orthogroups_2024-Update
Sopen09g022610 No alias Ring finger domain 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005488 binding IEP Predicted GO
BP GO:0006457 protein folding IEP Predicted GO
BP GO:0006996 organelle organization IEP Predicted GO
BP GO:0016043 cellular component organization IEP Predicted GO
BP GO:0022607 cellular component assembly IEP Predicted GO
BP GO:0022618 ribonucleoprotein complex assembly IEP Predicted GO
BP GO:0034622 cellular protein-containing complex assembly IEP Predicted GO
BP GO:0042255 ribosome assembly IEP Predicted GO
BP GO:0042256 mature ribosome assembly IEP Predicted GO
MF GO:0043021 ribonucleoprotein complex binding IEP Predicted GO
MF GO:0043022 ribosome binding IEP Predicted GO
BP GO:0043933 protein-containing complex subunit organization IEP Predicted GO
MF GO:0044877 protein-containing complex binding IEP Predicted GO
BP GO:0065003 protein-containing complex assembly IEP Predicted GO
BP GO:0070925 organelle assembly IEP Predicted GO
BP GO:0071826 ribonucleoprotein complex subunit organization IEP Predicted GO
BP GO:0071840 cellular component organization or biogenesis IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!