Solyc11g008740

Description : Sister chromatid cohesion 1 protein 3 (AHRD V3.3 *** W9SSS4_9ROSA)

Gene families : OG_42_0001499 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001499_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Solanum release: Solyc11g008740
Cluster	HCCA clusters: Cluster_167

Target	Alias	Description	ECC score	Gene Family Method	Actions
Brara.J01888.1	No alias	mitotic-specific Kleisin-type component *(SCC1) of...	0.03	Orthogroups_2024-Update
Mp5g04800.1	No alias	mitotic-specific Kleisin-type component SCC1 of cohesin...	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
CC	GO:0000228	nuclear chromosome	IEA	InterProScan predictions
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IEA	InterProScan predictions
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005694	chromosome	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
CC	GO:0044422	organelle part	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044428	nuclear part	None	Extended
CC	GO:0044446	intracellular organelle part	None	Extended
CC	GO:0044464	cell part	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0008536	Ran GTPase binding	IEP	Predicted GO
BP	GO:0009966	regulation of signal transduction	IEP	Predicted GO
BP	GO:0010646	regulation of cell communication	IEP	Predicted GO
BP	GO:0023051	regulation of signaling	IEP	Predicted GO
BP	GO:0048583	regulation of response to stimulus	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR006909	Rad21/Rec8_C_eu	1221	1272
IPR006910	Rad21_Rec8_N	1	102

External Links

No external refs found!