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  5. Solyc11g008900

Solyc11g008900


Description : Zinc finger transcription factor 65


Gene families : OG_42_0000464 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000464_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc11g008900
Cluster HCCA clusters: Cluster_130

Target Alias Description ECC score Gene Family Method Actions
A4A49_10593 No alias zinc finger ccch domain-containing protein zfn-like protein 0.03 Orthogroups_2024-Update
At3g06410 No alias Zinc finger CCCH domain-containing protein 34... 0.03 Orthogroups_2024-Update
At5g16540 No alias Zinc finger CCCH domain-containing protein 57... 0.03 Orthogroups_2024-Update
Bradi4g08050 No alias zinc finger protein 1 0.02 Orthogroups_2024-Update
Brara.C03010.1 No alias regulatory protein of RNA homeostasis 0.06 Orthogroups_2024-Update
Brara.E03281.1 No alias regulatory protein of RNA homeostasis 0.05 Orthogroups_2024-Update
Brara.J01714.1 No alias regulatory protein of RNA homeostasis 0.05 Orthogroups_2024-Update
GRMZM2G087032 No alias zinc finger protein 1 0.03 Orthogroups_2024-Update
GRMZM2G107491 No alias zinc finger protein 1 0.03 Orthogroups_2024-Update
GRMZM2G475017 No alias Zinc finger C-x8-C-x5-C-x3-H type family protein 0.03 Orthogroups_2024-Update
Glyma.02G153600 No alias Zinc finger C-x8-C-x5-C-x3-H type family protein 0.02 Orthogroups_2024-Update
Glyma.07G250000 No alias Zinc finger C-x8-C-x5-C-x3-H type family protein 0.03 Orthogroups_2024-Update
Glyma.09G251200 No alias zinc finger protein 1 0.04 Orthogroups_2024-Update
Glyma.10G170800 No alias zinc finger protein 1 0.04 Orthogroups_2024-Update
LOC_Os01g15350 No alias zinc finger C-x8-C-x5-C-x3-H type family protein, expressed 0.02 Orthogroups_2024-Update
LOC_Os01g68860 No alias zinc finger C-x8-C-x5-C-x3-H type family protein, expressed 0.04 Orthogroups_2024-Update
LOC_Os12g21700 No alias zinc finger C-x8-C-x5-C-x3-H type family protein, expressed 0.03 Orthogroups_2024-Update
Potri.019G053200 No alias zinc finger protein 1 0.04 Orthogroups_2024-Update
Sopen11g004680 No alias Zinc finger C-x8-C-x5-C-x3-H type (and similar) 0.18 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0046872 metal ion binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP Predicted GO
MF GO:0003951 NAD+ kinase activity IEP Predicted GO
MF GO:0004332 fructose-bisphosphate aldolase activity IEP Predicted GO
MF GO:0005509 calcium ion binding IEP Predicted GO
BP GO:0006732 coenzyme metabolic process IEP Predicted GO
BP GO:0006733 oxidoreduction coenzyme metabolic process IEP Predicted GO
BP GO:0006739 NADP metabolic process IEP Predicted GO
BP GO:0006741 NADP biosynthetic process IEP Predicted GO
BP GO:0006753 nucleoside phosphate metabolic process IEP Predicted GO
BP GO:0009108 coenzyme biosynthetic process IEP Predicted GO
BP GO:0009117 nucleotide metabolic process IEP Predicted GO
MF GO:0010277 chlorophyllide a oxygenase [overall] activity IEP Predicted GO
BP GO:0015969 guanosine tetraphosphate metabolic process IEP Predicted GO
MF GO:0016597 amino acid binding IEP Predicted GO
MF GO:0016703 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases) IEP Predicted GO
MF GO:0016780 phosphotransferase activity, for other substituted phosphate groups IEP Predicted GO
MF GO:0016832 aldehyde-lyase activity IEP Predicted GO
BP GO:0019359 nicotinamide nucleotide biosynthetic process IEP Predicted GO
BP GO:0019362 pyridine nucleotide metabolic process IEP Predicted GO
BP GO:0019363 pyridine nucleotide biosynthetic process IEP Predicted GO
BP GO:0019637 organophosphate metabolic process IEP Predicted GO
BP GO:0030163 protein catabolic process IEP Predicted GO
MF GO:0030976 thiamine pyrophosphate binding IEP Predicted GO
MF GO:0031406 carboxylic acid binding IEP Predicted GO
BP GO:0033865 nucleoside bisphosphate metabolic process IEP Predicted GO
BP GO:0033875 ribonucleoside bisphosphate metabolic process IEP Predicted GO
BP GO:0034032 purine nucleoside bisphosphate metabolic process IEP Predicted GO
BP GO:0034035 purine ribonucleoside bisphosphate metabolic process IEP Predicted GO
MF GO:0043177 organic acid binding IEP Predicted GO
BP GO:0046496 nicotinamide nucleotide metabolic process IEP Predicted GO
BP GO:0051188 cofactor biosynthetic process IEP Predicted GO
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP Predicted GO
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP Predicted GO
BP GO:0072524 pyridine-containing compound metabolic process IEP Predicted GO
BP GO:0072525 pyridine-containing compound biosynthetic process IEP Predicted GO
BP GO:0090407 organophosphate biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR000571 Znf_CCCH 48 73
IPR000571 Znf_CCCH 340 365
IPR000571 Znf_CCCH 94 118
IPR000571 Znf_CCCH 140 164
IPR000571 Znf_CCCH 294 319
No external refs found!