Solyc11g008930

Description : lysine ketoglutarate reductase trans-splicing-like protein, putative (DUF707) (AHRD V3.3 *** AT4G18530.3)

Gene families : OG_42_0000260 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000260_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Solanum release: Solyc11g008930
Cluster	HCCA clusters: Cluster_259

Target	Alias	Description	ECC score	Gene Family Method
Glyma.08G132000	No alias	Protein of unknown function (DUF707)	0.03	Orthogroups_2024-Update
Glyma.08G132100	No alias	Protein of unknown function (DUF707)	0.02	Orthogroups_2024-Update
Potri.009G011000	No alias	Protein of unknown function (DUF707)	0.03	Orthogroups_2024-Update
Solyc05g013650	No alias	LOW QUALITY:lysine ketoglutarate reductase...	0.03	Orthogroups_2024-Update
Solyc11g069550	No alias	lysine ketoglutarate reductase trans-splicing protein...	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
No GO annotation available for this sequence

Type	GO Term	Name	Evidence	Source
BP	GO:0000375	RNA splicing, via transesterification reactions	IEP	Predicted GO
BP	GO:0000377	RNA splicing, via transesterification reactions with bulged adenosine as nucleophile	IEP	Predicted GO
BP	GO:0000398	mRNA splicing, via spliceosome	IEP	Predicted GO
CC	GO:0005681	spliceosomal complex	IEP	Predicted GO
BP	GO:0008380	RNA splicing	IEP	Predicted GO
MF	GO:0015095	magnesium ion transmembrane transporter activity	IEP	Predicted GO
BP	GO:0015693	magnesium ion transport	IEP	Predicted GO
CC	GO:0016020	membrane	IEP	Predicted GO
MF	GO:0045735	nutrient reservoir activity	IEP	Predicted GO
BP	GO:0070838	divalent metal ion transport	IEP	Predicted GO
BP	GO:0072511	divalent inorganic cation transport	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR007877	DUF707	25	348

External Links

No external refs found!