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  5. Pp1s126_137V6

Pp1s126_137V6


Description : MBD2.5; expressed protein [Arabidopsis thaliana]


Gene families : OG_42_0000892 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000892_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Physcomitrella release: Pp1s126_137V6
Cluster HCCA clusters: Cluster_262

Target Alias Description ECC score Gene Family Method Actions
75450 No alias Function unknown 0.02 Orthogroups_2024-Update
At4g35170 No alias Late embryogenesis abundant (LEA) hydroxyproline-rich... 0.03 Orthogroups_2024-Update
Bradi3g51270 No alias Function unknown 0.02 Orthogroups_2024-Update
Brara.I01757.1 No alias Unknown function 0.03 Orthogroups_2024-Update
GRMZM2G131155 No alias Function unknown 0.02 Orthogroups_2024-Update
Glyma.13G357632 No alias Late embryogenesis abundant protein, group 2 0.03 Orthogroups_2024-Update
HORVU6Hr1G064440.2 No alias Unknown function 0.03 Orthogroups_2024-Update
LOC_Os01g12820 No alias harpin-induced protein, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os04g35130 No alias expressed protein 0.03 Orthogroups_2024-Update
Seita.3G004500.1 No alias microtubule-interacting component *(CC) of cellulose... 0.03 Orthogroups_2024-Update
Seita.4G062100.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.7G099300.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Solyc03g120710 No alias Late embryogenesis abundant protein (AHRD V3.3 *** G7II20_MEDTR) 0.03 Orthogroups_2024-Update
Solyc04g078750 No alias Late embryogenesis abundant protein (AHRD V3.3 *** G7LCF7_MEDTR) 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0003333 amino acid transmembrane transport IEP Predicted GO
MF GO:0004674 protein serine/threonine kinase activity IEP Predicted GO
CC GO:0005576 extracellular region IEP Predicted GO
CC GO:0005618 cell wall IEP Predicted GO
BP GO:0006633 fatty acid biosynthetic process IEP Predicted GO
BP GO:0006820 anion transport IEP Predicted GO
BP GO:0006865 amino acid transport IEP Predicted GO
BP GO:0009116 nucleoside metabolic process IEP Predicted GO
BP GO:0009119 ribonucleoside metabolic process IEP Predicted GO
BP GO:0015711 organic anion transport IEP Predicted GO
BP GO:0015849 organic acid transport IEP Predicted GO
BP GO:0015969 guanosine tetraphosphate metabolic process IEP Predicted GO
BP GO:0016579 protein deubiquitination IEP Predicted GO
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Predicted GO
MF GO:0019783 ubiquitin-like protein-specific protease activity IEP Predicted GO
CC GO:0030312 external encapsulating structure IEP Predicted GO
BP GO:0033865 nucleoside bisphosphate metabolic process IEP Predicted GO
BP GO:0033875 ribonucleoside bisphosphate metabolic process IEP Predicted GO
BP GO:0034032 purine nucleoside bisphosphate metabolic process IEP Predicted GO
BP GO:0034035 purine ribonucleoside bisphosphate metabolic process IEP Predicted GO
MF GO:0036459 thiol-dependent ubiquitinyl hydrolase activity IEP Predicted GO
BP GO:0042278 purine nucleoside metabolic process IEP Predicted GO
BP GO:0046128 purine ribonucleoside metabolic process IEP Predicted GO
BP GO:0046942 carboxylic acid transport IEP Predicted GO
CC GO:0048046 apoplast IEP Predicted GO
BP GO:0070646 protein modification by small protein removal IEP Predicted GO
BP GO:0098656 anion transmembrane transport IEP Predicted GO
MF GO:0101005 ubiquitinyl hydrolase activity IEP Predicted GO
BP GO:1901068 guanosine-containing compound metabolic process IEP Predicted GO
BP GO:1901657 glycosyl compound metabolic process IEP Predicted GO
BP GO:1903825 organic acid transmembrane transport IEP Predicted GO
BP GO:1905039 carboxylic acid transmembrane transport IEP Predicted GO
InterPro domains Description Start Stop
IPR004864 LEA_2 201 284
No external refs found!