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  5. Pp1s126_162V6

Pp1s126_162V6


Description : T2L20.24; expressed protein [Arabidopsis thaliana]


Gene families : OG_42_0000452 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000452_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Physcomitrella release: Pp1s126_162V6
Cluster HCCA clusters: Cluster_195

Target Alias Description ECC score Gene Family Method Actions
At3g23270 No alias Regulator of chromosome condensation (RCC1) family with... 0.04 Orthogroups_2024-Update
HORVU1Hr1G078890.8 No alias Unknown function 0.01 Orthogroups_2024-Update
MA_54149g0010 No alias (at5g42140 : 796.0) Regulator of chromosome condensation... 0.02 Orthogroups_2024-Update
PSME_00003946-RA No alias (at5g19420 : 1170.0) Regulator of chromosome... 0.01 Orthogroups_2024-Update
Sobic.003G438900.1 No alias regulatory protein *(RLD) of gravity sensing 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0046872 metal ion binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP Predicted GO
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP Predicted GO
MF GO:0016853 isomerase activity IEP Predicted GO
MF GO:0016859 cis-trans isomerase activity IEP Predicted GO
BP GO:0018193 peptidyl-amino acid modification IEP Predicted GO
BP GO:0018208 peptidyl-proline modification IEP Predicted GO
InterPro domains Description Start Stop
IPR000408 Reg_chr_condens 447 495
IPR000408 Reg_chr_condens 391 443
IPR000408 Reg_chr_condens 340 388
IPR000408 Reg_chr_condens 616 663
IPR000408 Reg_chr_condens 562 611
IPR000408 Reg_chr_condens 510 559
IPR013591 Brevis_radix_dom 1114 1169
IPR027988 BRX_N 942 971
IPR000306 Znf_FYVE 667 733
No external refs found!