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  5. Solyc11g010100

Solyc11g010100


Description : Ras-related protein Rab11D (AHRD V3.3 *** RB11D_TOBAC)


Gene families : OG_42_0000131 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000131_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc11g010100
Cluster HCCA clusters: Cluster_73

Target Alias Description ECC score Gene Family Method Actions
Bradi3g35100 No alias RAB GTPase homolog A1F 0.02 Orthogroups_2024-Update
Glyma.11G135400 No alias RAB GTPase homolog A2B 0.04 Orthogroups_2024-Update
Glyma.13G293200 No alias RAB GTPase homolog A1F 0.03 Orthogroups_2024-Update
HORVU1Hr1G033390.3 No alias A-class RAB GTPase 0.03 Orthogroups_2024-Update
HORVU5Hr1G080990.3 No alias Unknown function 0.02 Orthogroups_2024-Update
LOC_Os01g54590 No alias ras-related protein, putative, expressed 0.03 Orthogroups_2024-Update
Potri.016G050400 No alias RAB GTPase homolog A4D 0.02 Orthogroups_2024-Update
Pp1s21_298V6 No alias ras-related protein rab11a 0.02 Orthogroups_2024-Update
Sopen06g001790 No alias Ras family 0.03 Orthogroups_2024-Update
Sopen10g015820 No alias Ras family 0.03 Orthogroups_2024-Update
Sopen11g004900 No alias Ras family 0.03 Orthogroups_2024-Update
evm.model.contig_435.23 No alias (q39572|yptc6_chlre : 307.0) Ras-related protein YPTC6 -... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005525 GTP binding IEA InterProScan predictions
BP GO:0007264 small GTPase mediated signal transduction IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0000041 transition metal ion transport IEP Predicted GO
BP GO:0000096 sulfur amino acid metabolic process IEP Predicted GO
MF GO:0004489 methylenetetrahydrofolate reductase (NAD(P)H) activity IEP Predicted GO
MF GO:0005381 iron ion transmembrane transporter activity IEP Predicted GO
BP GO:0006555 methionine metabolic process IEP Predicted GO
BP GO:0006812 cation transport IEP Predicted GO
BP GO:0006826 iron ion transport IEP Predicted GO
MF GO:0008081 phosphoric diester hydrolase activity IEP Predicted GO
MF GO:0008168 methyltransferase activity IEP Predicted GO
MF GO:0008324 cation transmembrane transporter activity IEP Predicted GO
MF GO:0008536 Ran GTPase binding IEP Predicted GO
BP GO:0009066 aspartate family amino acid metabolic process IEP Predicted GO
MF GO:0015298 solute:cation antiporter activity IEP Predicted GO
MF GO:0015299 solute:proton antiporter activity IEP Predicted GO
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP Predicted GO
CC GO:0016021 integral component of membrane IEP Predicted GO
MF GO:0016597 amino acid binding IEP Predicted GO
MF GO:0016645 oxidoreductase activity, acting on the CH-NH group of donors IEP Predicted GO
MF GO:0016646 oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor IEP Predicted GO
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Predicted GO
MF GO:0017016 Ras GTPase binding IEP Predicted GO
MF GO:0022890 inorganic cation transmembrane transporter activity IEP Predicted GO
CC GO:0031224 intrinsic component of membrane IEP Predicted GO
MF GO:0031267 small GTPase binding IEP Predicted GO
MF GO:0031406 carboxylic acid binding IEP Predicted GO
BP GO:0034755 iron ion transmembrane transport IEP Predicted GO
MF GO:0043177 organic acid binding IEP Predicted GO
CC GO:0044425 membrane part IEP Predicted GO
MF GO:0046915 transition metal ion transmembrane transporter activity IEP Predicted GO
MF GO:0051020 GTPase binding IEP Predicted GO
MF GO:0070569 uridylyltransferase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR001806 Small_GTPase 19 178
No external refs found!