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  5. Pp1s126_33V6

Pp1s126_33V6


Description : LOC397994; middle molecular weight neurofilament protein NF-M(1) [Xenopus laevis]


Gene families : OG_42_0000000 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Physcomitrella release: Pp1s126_33V6
Cluster HCCA clusters: Cluster_370

Target Alias Description ECC score Gene Family Method Actions
A4A49_16120 No alias ethylene-responsive transcription factor erf061 0.02 Orthogroups_2024-Update
Brara.B01950.1 No alias transcription factor *(CRF) & subgroup ERF-VI... 0.03 Orthogroups_2024-Update
Brara.G03123.1 No alias subgroup ERF-VII transcription factor & transcription... 0.03 Orthogroups_2024-Update
Glyma.06G064000 No alias Integrase-type DNA-binding superfamily protein 0.02 Orthogroups_2024-Update
Glyma.07G031200 No alias Integrase-type DNA-binding superfamily protein 0.02 Orthogroups_2024-Update
Glyma.12G162700 No alias ethylene responsive element binding factor 4 0.02 Orthogroups_2024-Update
Glyma.13G233800 No alias Integrase-type DNA-binding superfamily protein 0.02 Orthogroups_2024-Update
Glyma.17G145400 No alias ethylene responsive element binding factor 1 0.02 Orthogroups_2024-Update
Potri.019G036100 No alias related to AP2 11 0.02 Orthogroups_2024-Update
Pp1s130_106V6 No alias ap2 erf domain-containing transcription factor 0.02 Orthogroups_2024-Update
Pp1s199_50V6 No alias ap2 erf domain-containing transcription factor 0.02 Orthogroups_2024-Update
Sobic.003G324500.1 No alias subgroup ERF-VIII transcription factor 0.01 Orthogroups_2024-Update
Solyc01g008880 No alias Solanum lycopersicum Cytokinin Response Factor 8 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004523 RNA-DNA hybrid ribonuclease activity IEP Predicted GO
MF GO:0008061 chitin binding IEP Predicted GO
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEP Predicted GO
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP Predicted GO
MF GO:0030151 molybdenum ion binding IEP Predicted GO
BP GO:0042126 nitrate metabolic process IEP Predicted GO
BP GO:0042128 nitrate assimilation IEP Predicted GO
BP GO:0071941 nitrogen cycle metabolic process IEP Predicted GO
BP GO:2001057 reactive nitrogen species metabolic process IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!