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  5. Pp1s12_234V6

Pp1s12_234V6


Description : pcdc2 rp-


Gene families : OG_42_0003906 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0003906_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Physcomitrella release: Pp1s12_234V6
Cluster HCCA clusters: Cluster_82

Target Alias Description ECC score Gene Family Method Actions
GRMZM2G082573 No alias transcription regulators 0.03 Orthogroups_2024-Update
Seita.9G435400.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Solyc08g076440 No alias Programmed cell death protein 2 (AHRD V3.3 *** A0A0B0NZT2_GOSAR) 0.03 Orthogroups_2024-Update
evm.model.tig00020961.63 No alias (at4g02220 : 83.2) zinc finger (MYND type) family... 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0005737 cytoplasm IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0004555 alpha,alpha-trehalase activity IEP Predicted GO
CC GO:0005730 nucleolus IEP Predicted GO
BP GO:0005984 disaccharide metabolic process IEP Predicted GO
BP GO:0005991 trehalose metabolic process IEP Predicted GO
BP GO:0006364 rRNA processing IEP Predicted GO
BP GO:0009311 oligosaccharide metabolic process IEP Predicted GO
MF GO:0015927 trehalase activity IEP Predicted GO
BP GO:0016072 rRNA metabolic process IEP Predicted GO
BP GO:0034470 ncRNA processing IEP Predicted GO
InterPro domains Description Start Stop
IPR007320 PDCD2_C 287 454
IPR002893 Znf_MYND 190 228
No external refs found!