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  5. Pp1s12_287V6

Pp1s12_287V6


Description : F25C20.1; glycosyl hydrolase family 17 protein [Arabidopsis thaliana]


Gene families : OG_42_0000165 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000165_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Physcomitrella release: Pp1s12_287V6
Cluster HCCA clusters: Cluster_271

Target Alias Description ECC score Gene Family Method Actions
At1g13830 No alias Carbohydrate-binding X8 domain superfamily protein... 0.03 Orthogroups_2024-Update
At5g08000 No alias glucan endo-1,3-beta-glucosidase-like protein 3... 0.02 Orthogroups_2024-Update
Glyma.08G122400 No alias Carbohydrate-binding X8 domain superfamily protein 0.02 Orthogroups_2024-Update
LOC_Os03g54910 No alias X8 domain containing protein, expressed 0.02 Orthogroups_2024-Update
MA_10427115g0010 No alias (at2g30933 : 122.0) Carbohydrate-binding X8 domain... 0.02 Orthogroups_2024-Update
Potri.019G012000 No alias Carbohydrate-binding X8 domain superfamily protein 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP Predicted GO
MF GO:0003674 molecular_function IEP Predicted GO
MF GO:0003677 DNA binding IEP Predicted GO
MF GO:0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity IEP Predicted GO
MF GO:0004559 alpha-mannosidase activity IEP Predicted GO
MF GO:0004571 mannosyl-oligosaccharide 1,2-alpha-mannosidase activity IEP Predicted GO
MF GO:0005488 binding IEP Predicted GO
MF GO:0005515 protein binding IEP Predicted GO
BP GO:0006694 steroid biosynthetic process IEP Predicted GO
BP GO:0008202 steroid metabolic process IEP Predicted GO
BP GO:0009308 amine metabolic process IEP Predicted GO
BP GO:0009690 cytokinin metabolic process IEP Predicted GO
BP GO:0010817 regulation of hormone levels IEP Predicted GO
MF GO:0015923 mannosidase activity IEP Predicted GO
MF GO:0015924 mannosyl-oligosaccharide mannosidase activity IEP Predicted GO
MF GO:0016229 steroid dehydrogenase activity IEP Predicted GO
MF GO:0016645 oxidoreductase activity, acting on the CH-NH group of donors IEP Predicted GO
MF GO:0019139 cytokinin dehydrogenase activity IEP Predicted GO
MF GO:0033764 steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Predicted GO
BP GO:0034754 cellular hormone metabolic process IEP Predicted GO
BP GO:0042445 hormone metabolic process IEP Predicted GO
MF GO:0097159 organic cyclic compound binding IEP Predicted GO
MF GO:1901363 heterocyclic compound binding IEP Predicted GO
InterPro domains Description Start Stop
IPR012946 X8 44 119
No external refs found!