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Pp1s12_3V6


No description available


Gene families : OG_42_0000122 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000122_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Physcomitrella release: Pp1s12_3V6
Cluster HCCA clusters: Cluster_65

Target Alias Description ECC score Gene Family Method Actions
Bradi3g37043 No alias mini zinc finger 2 0.01 Orthogroups_2024-Update
Bradi4g30240 No alias homeobox protein 30 0.02 Orthogroups_2024-Update
Brara.G02231.1 No alias zf-HD-type transcription factor 0.02 Orthogroups_2024-Update
GRMZM2G328438 No alias homeobox protein 31 0.02 Orthogroups_2024-Update
Glyma.20G036502 No alias zinc finger homeodomain 1 0.03 Orthogroups_2024-Update
LOC_Os05g50310 No alias ZF-HD protein dimerisation region containing protein, expressed 0.02 Orthogroups_2024-Update
Pp1s3_539V6 No alias F22H5.4; zinc finger homeobox family protein / ZF-HD... 0.02 Orthogroups_2024-Update
Seita.1G290100.1 No alias zf-HD-type transcription factor 0.02 Orthogroups_2024-Update
Seita.6G185900.1 No alias zf-HD-type transcription factor 0.02 Orthogroups_2024-Update
Sobic.005G086700.4 No alias zf-HD-type transcription factor 0.02 Orthogroups_2024-Update
Sobic.007G139200.1 No alias zf-HD-type transcription factor 0.02 Orthogroups_2024-Update
Solyc01g102980 No alias ZF-HD homeobox protein family (AHRD V3.3 *** A0A151SB96_CAJCA) 0.02 Orthogroups_2024-Update
Solyc02g067310 No alias ZF-HD homeobox protein (AHRD V3.3 *** Q9ARE3_FLABI) 0.02 Orthogroups_2024-Update
Solyc04g014260 No alias ZF-HD homeobox protein family (AHRD V3.3 *** A0A151QZQ5_CAJCA) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0010215 cellulose microfibril organization IEP Predicted GO
BP GO:0016049 cell growth IEP Predicted GO
BP GO:0030198 extracellular matrix organization IEP Predicted GO
CC GO:0031225 anchored component of membrane IEP Predicted GO
BP GO:0040007 growth IEP Predicted GO
BP GO:0043062 extracellular structure organization IEP Predicted GO
InterPro domains Description Start Stop
IPR006456 ZF_HD_homeobox_Cys/His_dimer 133 185
No external refs found!