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  5. Pp1s133_93V6

Pp1s133_93V6


Description : 60s ribosomal protein l35


Gene families : OG_42_0001364 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001364_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Physcomitrella release: Pp1s133_93V6
Cluster HCCA clusters: Cluster_147

Target Alias Description ECC score Gene Family Method Actions
438324 No alias Ribosomal L29 family protein 0.17 Orthogroups_2024-Update
A4A49_28237 No alias 60s ribosomal protein l35-4 0.22 Orthogroups_2024-Update
A4A49_63512 No alias 60s ribosomal protein l35-4 0.12 Orthogroups_2024-Update
AC206642.4_FG001 No alias Ribosomal L29 family protein 0.1 Orthogroups_2024-Update
At2g39390 No alias 60S ribosomal protein L35-2... 0.03 Orthogroups_2024-Update
Bradi3g43840 No alias Ribosomal L29 family protein 0.03 Orthogroups_2024-Update
Bradi5g07170 No alias Ribosomal L29 family protein 0.15 Orthogroups_2024-Update
Brara.A03526.1 No alias component *(uL29) of large ribosomal-subunit (LSU) proteome 0.19 Orthogroups_2024-Update
Brara.B00059.1 No alias component *(uL29) of large ribosomal-subunit (LSU) proteome 0.03 Orthogroups_2024-Update
Brara.C03268.1 No alias component *(uL29) of large ribosomal-subunit (LSU) proteome 0.19 Orthogroups_2024-Update
Brara.E03085.1 No alias component *(uL29) of large ribosomal-subunit (LSU) proteome 0.19 Orthogroups_2024-Update
Cre14.g617900 No alias Ribosomal L29 family protein 0.3 Orthogroups_2024-Update
GRMZM2G043279 No alias Ribosomal L29 family protein 0.1 Orthogroups_2024-Update
Glyma.10G291500 No alias Ribosomal L29 family protein 0.2 Orthogroups_2024-Update
Glyma.13G133900 No alias Ribosomal L29 family protein 0.08 Orthogroups_2024-Update
Glyma.15G042300 No alias Ribosomal L29 family protein 0.03 Orthogroups_2024-Update
Glyma.20G240700 No alias Ribosomal L29 family protein 0.17 Orthogroups_2024-Update
HORVU2Hr1G068120.2 No alias component *(uL29) of large ribosomal-subunit (LSU) proteome 0.04 Orthogroups_2024-Update
Kfl00608_0050 kfl00608_0050_v1.1 (at5g02610 : 177.0) Ribosomal L29 family protein ;... 0.06 Orthogroups_2024-Update
LOC_Os02g30050 No alias ribosomal protein L29, putative, expressed 0.02 Orthogroups_2024-Update
MA_10429159g0020 No alias (at5g02610 : 210.0) Ribosomal L29 family protein ;... 0.12 Orthogroups_2024-Update
Mp6g05620.1 No alias component RPL35 of LSU proteome component 0.18 Orthogroups_2024-Update
PSME_00020825-RA No alias (at5g02610 : 157.0) Ribosomal L29 family protein ;... 0.17 Orthogroups_2024-Update
PSME_00033304-RA No alias (at5g02610 : 177.0) Ribosomal L29 family protein ;... 0.02 Orthogroups_2024-Update
PSME_00053522-RA No alias (at5g02610 : 154.0) Ribosomal L29 family protein ;... 0.02 Orthogroups_2024-Update
Potri.008G048800 No alias Ribosomal L29 family protein 0.05 Orthogroups_2024-Update
Potri.010G212300 No alias Ribosomal L29 family protein 0.13 Orthogroups_2024-Update
Seita.1G166300.1 No alias component *(uL29) of large ribosomal-subunit (LSU) proteome 0.05 Orthogroups_2024-Update
Seita.7G064700.1 No alias component *(uL29) of large ribosomal-subunit (LSU) proteome 0.14 Orthogroups_2024-Update
Sobic.004G152400.1 No alias component *(uL29) of large ribosomal-subunit (LSU) proteome 0.18 Orthogroups_2024-Update
Sobic.004G152700.1 No alias component *(uL29) of large ribosomal-subunit (LSU) proteome 0.27 Orthogroups_2024-Update
Solyc04g010240 No alias 60S ribosomal protein L35 (AHRD V3.3 *** RL35_EUPES) 0.17 Orthogroups_2024-Update
Solyc05g054810 No alias 60S ribosomal protein L35 (AHRD V3.3 *** RL35_EUPES) 0.21 Orthogroups_2024-Update
Solyc06g075620 No alias 60S ribosomal protein L35 (AHRD V3.3 *** RL35_EUPES) 0.03 Orthogroups_2024-Update
Sopen04g005430 No alias Ribosomal L29 protein 0.1 Orthogroups_2024-Update
Sopen05g033280 No alias Ribosomal L29 protein 0.17 Orthogroups_2024-Update
evm.model.contig_654.2 No alias (at5g02610 : 134.0) Ribosomal L29 family protein ;... 0.21 Orthogroups_2024-Update
evm.model.tig00000241.79 No alias (at3g55170 : 158.0) Ribosomal L29 family protein ;... 0.26 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA InterProScan predictions
CC GO:0005622 intracellular IEA InterProScan predictions
CC GO:0005840 ribosome IEA InterProScan predictions
BP GO:0006412 translation IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP Predicted GO
CC GO:0005743 mitochondrial inner membrane IEP Predicted GO
BP GO:0006091 generation of precursor metabolites and energy IEP Predicted GO
CC GO:0015934 large ribosomal subunit IEP Predicted GO
MF GO:0019843 rRNA binding IEP Predicted GO
CC GO:0019866 organelle inner membrane IEP Predicted GO
BP GO:0022900 electron transport chain IEP Predicted GO
CC GO:0031090 organelle membrane IEP Predicted GO
CC GO:0031966 mitochondrial membrane IEP Predicted GO
CC GO:0044391 ribosomal subunit IEP Predicted GO
CC GO:0044422 organelle part IEP Predicted GO
CC GO:0044429 mitochondrial part IEP Predicted GO
CC GO:0044446 intracellular organelle part IEP Predicted GO
CC GO:0070469 respiratory chain IEP Predicted GO
InterPro domains Description Start Stop
IPR001854 Ribosomal_L29/L35 8 63
No external refs found!