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  5. Solyc11g011410

Solyc11g011410


Description : Pentatricopeptide repeat-containing family protein (AHRD V3.3 *** U5FHA0_POPTR)


Gene families : OG_42_0009412 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0009412_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc11g011410
Cluster HCCA clusters: Cluster_22


Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0008536 Ran GTPase binding IEP Predicted GO
BP GO:0009116 nucleoside metabolic process IEP Predicted GO
MF GO:0017016 Ras GTPase binding IEP Predicted GO
MF GO:0031267 small GTPase binding IEP Predicted GO
MF GO:0051020 GTPase binding IEP Predicted GO
BP GO:1901657 glycosyl compound metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 481 513
IPR002885 Pentatricopeptide_repeat 447 477
IPR002885 Pentatricopeptide_repeat 236 267
IPR002885 Pentatricopeptide_repeat 341 372
IPR002885 Pentatricopeptide_repeat 519 568
IPR002885 Pentatricopeptide_repeat 379 428
IPR002885 Pentatricopeptide_repeat 274 323
IPR002885 Pentatricopeptide_repeat 175 201
No external refs found!