1. Home
  2. Species
  3. Physcomitrella patens
  4. Sequence
  5. Pp1s13_167V6

Pp1s13_167V6


Description : zinc ring-type


Gene families : OG_42_0002510 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002510_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Physcomitrella release: Pp1s13_167V6
Cluster HCCA clusters: Cluster_295

Target Alias Description ECC score Gene Family Method Actions
At5g22000 No alias RHF2A [Source:UniProtKB/TrEMBL;Acc:A0A178UA98] 0.03 Orthogroups_2024-Update
MA_35039g0010 No alias (at5g22000 : 210.0) encodes a RING-type E3 ubiquitin... 0.02 Orthogroups_2024-Update
Mp4g17090.1 No alias E3 ubiquitin-protein ligase RHF2A OS=Arabidopsis... 0.02 Orthogroups_2024-Update
Sopen06g030260 No alias hypothetical protein 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0001522 pseudouridine synthesis IEP Predicted GO
MF GO:0003847 1-alkyl-2-acetylglycerophosphocholine esterase activity IEP Predicted GO
CC GO:0005795 Golgi stack IEP Predicted GO
BP GO:0006486 protein glycosylation IEP Predicted GO
MF GO:0008252 nucleotidase activity IEP Predicted GO
MF GO:0008253 5'-nucleotidase activity IEP Predicted GO
MF GO:0008378 galactosyltransferase activity IEP Predicted GO
MF GO:0008455 alpha-1,6-mannosylglycoprotein 2-beta-N-acetylglucosaminyltransferase activity IEP Predicted GO
BP GO:0009262 deoxyribonucleotide metabolic process IEP Predicted GO
BP GO:0009264 deoxyribonucleotide catabolic process IEP Predicted GO
BP GO:0016042 lipid catabolic process IEP Predicted GO
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Predicted GO
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Predicted GO
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Predicted GO
CC GO:0030126 COPI vesicle coat IEP Predicted GO
CC GO:0031984 organelle subcompartment IEP Predicted GO
BP GO:0042254 ribosome biogenesis IEP Predicted GO
BP GO:0043413 macromolecule glycosylation IEP Predicted GO
CC GO:0044431 Golgi apparatus part IEP Predicted GO
BP GO:0070085 glycosylation IEP Predicted GO
CC GO:0098791 Golgi subcompartment IEP Predicted GO
MF GO:0140103 catalytic activity, acting on a glycoprotein IEP Predicted GO
BP GO:1901136 carbohydrate derivative catabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR001841 Znf_RING 19 60
No external refs found!