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  5. Solyc11g011940

Solyc11g011940


Description : Homeobox-leucine zipper family protein (AHRD V3.3 *-* B9N3B2_POPTR)


Gene families : OG_42_0000114 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000114_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc11g011940
Cluster HCCA clusters: Cluster_192

Target Alias Description ECC score Gene Family Method Actions
At4g25530 No alias Homeodomain-containing transcription factor FWA... 0.03 Orthogroups_2024-Update
Brara.H00913.1 No alias HD-ZIP IV-type transcription factor 0.02 Orthogroups_2024-Update
Brara.K01431.1 No alias HD-ZIP IV-type transcription factor 0.03 Orthogroups_2024-Update
GRMZM2G004957 No alias protodermal factor 2 0.03 Orthogroups_2024-Update
Seita.7G203300.1 No alias HD-ZIP IV-type transcription factor 0.04 Orthogroups_2024-Update
Sopen06g015560 No alias START domain 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA InterProScan predictions
MF GO:0008289 lipid binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0005506 iron ion binding IEP Predicted GO
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Predicted GO
MF GO:0020037 heme binding IEP Predicted GO
MF GO:0046906 tetrapyrrole binding IEP Predicted GO
InterPro domains Description Start Stop
IPR002913 START_lipid-bd_dom 240 345
IPR001356 Homeobox_dom 26 77
No external refs found!