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Description : helix-loop-helix dna-binding domain containing expressed
Gene families : OG_42_0000449 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000449_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Physcomitrella release: Pp1s147_126V6 | |
| Cluster | HCCA clusters: Cluster_81 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| 118904 | No alias | phytochrome interacting factor 3 | 0.03 | Orthogroups_2024-Update | |
| A4A49_38454 | No alias | transcription factor pif5 | 0.02 | Orthogroups_2024-Update | |
| At2g20180 | No alias | Transcription factor PIF1... | 0.03 | Orthogroups_2024-Update | |
| At3g59060 | No alias | Transcription factor PIF5... | 0.04 | Orthogroups_2024-Update | |
| Bradi1g13980 | No alias | phytochrome interacting factor 3-like 5 | 0.03 | Orthogroups_2024-Update | |
| Brara.C02178.1 | No alias | regulatory protein *(PIF) of red/far-red light... | 0.04 | Orthogroups_2024-Update | |
| Brara.C04242.1 | No alias | bHLH-type transcription factor | 0.05 | Orthogroups_2024-Update | |
| Brara.D02603.1 | No alias | regulatory protein *(PIF) of red/far-red light... | 0.03 | Orthogroups_2024-Update | |
| Brara.F00609.1 | No alias | regulatory protein *(PIF) of red/far-red light... | 0.03 | Orthogroups_2024-Update | |
| Brara.I04061.1 | No alias | regulatory protein *(PIF) of red/far-red light... | 0.04 | Orthogroups_2024-Update | |
| Brara.I05268.1 | No alias | regulatory protein *(PIF) of red/far-red light... | 0.04 | Orthogroups_2024-Update | |
| GRMZM2G016756 | No alias | phytochrome interacting factor 4 | 0.02 | Orthogroups_2024-Update | |
| GRMZM2G042920 | No alias | phytochrome interacting factor 3 | 0.02 | Orthogroups_2024-Update | |
| GRMZM2G062541 | No alias | phytochrome interacting factor 3 | 0.03 | Orthogroups_2024-Update | |
| Glyma.02G282100 | No alias | phytochrome interacting factor 4 | 0.02 | Orthogroups_2024-Update | |
| Glyma.03G170300 | No alias | phytochrome interacting factor 3-like 5 | 0.02 | Orthogroups_2024-Update | |
| Glyma.10G142600 | No alias | phytochrome interacting factor 3 | 0.02 | Orthogroups_2024-Update | |
| Glyma.18G115700 | No alias | phytochrome interacting factor 4 | 0.02 | Orthogroups_2024-Update | |
| HORVU6Hr1G088020.4 | No alias | bHLH-type transcription factor | 0.02 | Orthogroups_2024-Update | |
| Kfl00355_0070 | kfl00355_0070_v1.1 | no hits & (original description: no original description) | 0.02 | Orthogroups_2024-Update | |
| LOC_Os03g43810 | No alias | helix-loop-helix DNA-binding domain containing protein, expressed | 0.02 | Orthogroups_2024-Update | |
| Potri.005G207200 | No alias | phytochrome interacting factor 4 | 0.02 | Orthogroups_2024-Update | |
| Pp1s69_37V6 | No alias | dna binding | 0.02 | Orthogroups_2024-Update | |
| Seita.2G029600.1 | No alias | regulatory protein *(PIF) of red/far-red light... | 0.04 | Orthogroups_2024-Update | |
| Seita.9G067200.1 | No alias | regulatory protein *(PIF) of red/far-red light... | 0.05 | Orthogroups_2024-Update | |
| Seita.9G160700.1 | No alias | regulatory protein *(PIF) of red/far-red light... | 0.02 | Orthogroups_2024-Update | |
| Sobic.001G068301.1 | No alias | bHLH-type transcription factor | 0.03 | Orthogroups_2024-Update | |
| Solyc06g008030 | No alias | bHLH transcription factor 041 | 0.03 | Orthogroups_2024-Update | |
| Solyc07g043580 | No alias | bHLH transcription factor 052 | 0.02 | Orthogroups_2024-Update | |
| Solyc09g063010 | No alias | bHLH transcription factor 058 | 0.02 | Orthogroups_2024-Update | |
| Sopen07g023150 | No alias | Helix-loop-helix DNA-binding domain | 0.02 | Orthogroups_2024-Update |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0046983 | protein dimerization activity | IEA | InterProScan predictions |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0001871 | pattern binding | IEP | Predicted GO |
| MF | GO:0008171 | O-methyltransferase activity | IEP | Predicted GO |
| MF | GO:0016717 | oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water | IEP | Predicted GO |
| MF | GO:0016779 | nucleotidyltransferase activity | IEP | Predicted GO |
| MF | GO:0016868 | intramolecular transferase activity, phosphotransferases | IEP | Predicted GO |
| BP | GO:0019725 | cellular homeostasis | IEP | Predicted GO |
| BP | GO:0030001 | metal ion transport | IEP | Predicted GO |
| MF | GO:0030247 | polysaccharide binding | IEP | Predicted GO |
| CC | GO:0034357 | photosynthetic membrane | IEP | Predicted GO |
| BP | GO:0042592 | homeostatic process | IEP | Predicted GO |
| CC | GO:0042651 | thylakoid membrane | IEP | Predicted GO |
| BP | GO:0045454 | cell redox homeostasis | IEP | Predicted GO |
| BP | GO:0065008 | regulation of biological quality | IEP | Predicted GO |
| MF | GO:2001070 | starch binding | IEP | Predicted GO |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR011598 | bHLH_dom | 559 | 605 |
| No external refs found! |