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  5. Solyc11g012570

Solyc11g012570


Description : Pentatricopeptide repeat-containing protein (AHRD V3.3 *** A0A103XK68_CYNCS)


Gene families : OG_42_0009450 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0009450_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc11g012570
Cluster HCCA clusters: Cluster_159


Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP Predicted GO
CC GO:0005730 nucleolus IEP Predicted GO
BP GO:0006351 transcription, DNA-templated IEP Predicted GO
BP GO:0006855 drug transmembrane transport IEP Predicted GO
MF GO:0015238 drug transmembrane transporter activity IEP Predicted GO
MF GO:0015297 antiporter activity IEP Predicted GO
BP GO:0015893 drug transport IEP Predicted GO
MF GO:0034062 5'-3' RNA polymerase activity IEP Predicted GO
CC GO:0044428 nuclear part IEP Predicted GO
BP GO:0097659 nucleic acid-templated transcription IEP Predicted GO
MF GO:0097747 RNA polymerase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 334 362
IPR002885 Pentatricopeptide_repeat 174 200
IPR002885 Pentatricopeptide_repeat 231 279
No external refs found!