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  5. Pp1s152_31V6

Pp1s152_31V6


Description : rna polymerase ii ctd


Gene families : OG_42_0000924 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000924_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Physcomitrella release: Pp1s152_31V6
Cluster HCCA clusters: Cluster_295

Target Alias Description ECC score Gene Family Method Actions
405568 No alias C-terminal domain phosphatase-like 3 0.04 Orthogroups_2024-Update
Glyma.17G074700 No alias C-terminal domain phosphatase-like 4 0.02 Orthogroups_2024-Update
Mp1g29700.1 No alias subcluster H/CPL3-4 phosphatase 0.02 Orthogroups_2024-Update
Potri.018G108300 No alias C-terminal domain phosphatase-like 4 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000723 telomere maintenance IEP Predicted GO
MF GO:0003830 beta-1,4-mannosylglycoprotein 4-beta-N-acetylglucosaminyltransferase activity IEP Predicted GO
MF GO:0005216 ion channel activity IEP Predicted GO
BP GO:0006464 cellular protein modification process IEP Predicted GO
BP GO:0006486 protein glycosylation IEP Predicted GO
BP GO:0006487 protein N-linked glycosylation IEP Predicted GO
BP GO:0006807 nitrogen compound metabolic process IEP Predicted GO
MF GO:0008238 exopeptidase activity IEP Predicted GO
MF GO:0008375 acetylglucosaminyltransferase activity IEP Predicted GO
MF GO:0016740 transferase activity IEP Predicted GO
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Predicted GO
BP GO:0019538 protein metabolic process IEP Predicted GO
MF GO:0022838 substrate-specific channel activity IEP Predicted GO
MF GO:0030145 manganese ion binding IEP Predicted GO
BP GO:0032200 telomere organization IEP Predicted GO
BP GO:0036211 protein modification process IEP Predicted GO
BP GO:0043170 macromolecule metabolic process IEP Predicted GO
BP GO:0043412 macromolecule modification IEP Predicted GO
BP GO:0043413 macromolecule glycosylation IEP Predicted GO
BP GO:0044260 cellular macromolecule metabolic process IEP Predicted GO
BP GO:0044267 cellular protein metabolic process IEP Predicted GO
BP GO:0051276 chromosome organization IEP Predicted GO
BP GO:0060249 anatomical structure homeostasis IEP Predicted GO
MF GO:0070008 serine-type exopeptidase activity IEP Predicted GO
BP GO:0070085 glycosylation IEP Predicted GO
MF GO:0140096 catalytic activity, acting on a protein IEP Predicted GO
MF GO:0140103 catalytic activity, acting on a glycoprotein IEP Predicted GO
InterPro domains Description Start Stop
IPR004274 FCP1_dom 1290 1447
IPR001357 BRCT_dom 1533 1583
No external refs found!