1. Home
  2. Species
  3. Physcomitrella patens
  4. Sequence
  5. Pp1s152_53V6

Pp1s152_53V6


Description : branched chain keto acid dehydrogenase beta polypeptide


Gene families : OG_42_0006620 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0006620_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Physcomitrella release: Pp1s152_53V6
Cluster HCCA clusters: Cluster_41

Target Alias Description ECC score Gene Family Method Actions
At1g55510 No alias 2-oxoisovalerate dehydrogenase subunit beta 1,... 0.02 Orthogroups_2024-Update
Brara.H00052.1 No alias subunit beta of E1 subcomplex of 2-oxoisovalerate... 0.03 Orthogroups_2024-Update
Cre06.g311050 No alias Transketolase family protein 0.02 Orthogroups_2024-Update
Glyma.03G070200 No alias branched-chain alpha-keto acid decarboxylase E1 beta subunit 0.02 Orthogroups_2024-Update
HORVU6Hr1G017000.1 No alias Unknown function 0.02 Orthogroups_2024-Update
LOC_Os07g07470 No alias transketolase, putative, expressed 0.02 Orthogroups_2024-Update
Potri.003G222800 No alias branched-chain alpha-keto acid decarboxylase E1 beta subunit 0.02 Orthogroups_2024-Update
evm.model.contig_4476.6 No alias (at3g13450 : 425.0) branched chain alpha-keto acid... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Predicted GO
MF GO:0004672 protein kinase activity IEP Predicted GO
MF GO:0005216 ion channel activity IEP Predicted GO
MF GO:0005515 protein binding IEP Predicted GO
BP GO:0006464 cellular protein modification process IEP Predicted GO
BP GO:0006468 protein phosphorylation IEP Predicted GO
BP GO:0006793 phosphorus metabolic process IEP Predicted GO
BP GO:0006796 phosphate-containing compound metabolic process IEP Predicted GO
BP GO:0006810 transport IEP Predicted GO
BP GO:0007034 vacuolar transport IEP Predicted GO
BP GO:0009314 response to radiation IEP Predicted GO
BP GO:0009416 response to light stimulus IEP Predicted GO
BP GO:0009581 detection of external stimulus IEP Predicted GO
BP GO:0009582 detection of abiotic stimulus IEP Predicted GO
BP GO:0009583 detection of light stimulus IEP Predicted GO
BP GO:0009584 detection of visible light IEP Predicted GO
BP GO:0009605 response to external stimulus IEP Predicted GO
BP GO:0009628 response to abiotic stimulus IEP Predicted GO
MF GO:0016301 kinase activity IEP Predicted GO
BP GO:0016310 phosphorylation IEP Predicted GO
MF GO:0016740 transferase activity IEP Predicted GO
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Predicted GO
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Predicted GO
BP GO:0018298 protein-chromophore linkage IEP Predicted GO
BP GO:0019321 pentose metabolic process IEP Predicted GO
BP GO:0019566 arabinose metabolic process IEP Predicted GO
MF GO:0022838 substrate-specific channel activity IEP Predicted GO
BP GO:0036211 protein modification process IEP Predicted GO
BP GO:0043412 macromolecule modification IEP Predicted GO
BP GO:0044267 cellular protein metabolic process IEP Predicted GO
BP GO:0046373 L-arabinose metabolic process IEP Predicted GO
MF GO:0046556 alpha-L-arabinofuranosidase activity IEP Predicted GO
BP GO:0051179 localization IEP Predicted GO
BP GO:0051234 establishment of localization IEP Predicted GO
BP GO:0051606 detection of stimulus IEP Predicted GO
BP GO:0055085 transmembrane transport IEP Predicted GO
MF GO:0140096 catalytic activity, acting on a protein IEP Predicted GO
InterPro domains Description Start Stop
IPR005475 Transketolase-like_Pyr-bd 59 233
IPR033248 Transketolase_C 251 369
No external refs found!