1. Home
  2. Species
  3. Solanum lycopersicum
  4. Sequence
  5. Solyc11g012930

Solyc11g012930


Description : WAT1-related protein (AHRD V3.3 *** K4D697_SOLLC)


Gene families : OG_42_0000223 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000223_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc11g012930
Cluster HCCA clusters: Cluster_59

Target Alias Description ECC score Gene Family Method Actions
Glyma.06G112200 No alias nodulin MtN21 /EamA-like transporter family protein 0.02 Orthogroups_2024-Update
Glyma.14G151600 No alias nodulin MtN21 /EamA-like transporter family protein 0.03 Orthogroups_2024-Update
LOC_Os04g59120 No alias auxin-induced protein 5NG4, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os05g41420 No alias auxin-induced protein 5NG4, putative, expressed 0.03 Orthogroups_2024-Update
MA_110313g0010 No alias (at5g07050 : 391.0) nodulin MtN21 /EamA-like transporter... 0.02 Orthogroups_2024-Update
MA_404696g0010 No alias (at1g21890 : 239.0) nodulin MtN21 /EamA-like transporter... 0.03 Orthogroups_2024-Update
PSME_00022891-RA No alias (at5g07050 : 397.0) nodulin MtN21 /EamA-like transporter... 0.03 Orthogroups_2024-Update
PSME_00042371-RA No alias (at5g07050 : 367.0) nodulin MtN21 /EamA-like transporter... 0.03 Orthogroups_2024-Update
PSME_00044040-RA No alias (at4g08300 : 239.0) nodulin MtN21 /EamA-like transporter... 0.03 Orthogroups_2024-Update
Potri.005G176100 No alias nodulin MtN21 /EamA-like transporter family protein 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA InterProScan predictions
CC GO:0016021 integral component of membrane IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source
MF GO:0001871 pattern binding IEP Predicted GO
MF GO:0004650 polygalacturonase activity IEP Predicted GO
MF GO:0005337 nucleoside transmembrane transporter activity IEP Predicted GO
BP GO:0006397 mRNA processing IEP Predicted GO
BP GO:0010215 cellulose microfibril organization IEP Predicted GO
MF GO:0015932 nucleobase-containing compound transmembrane transporter activity IEP Predicted GO
BP GO:0016049 cell growth IEP Predicted GO
BP GO:0030198 extracellular matrix organization IEP Predicted GO
MF GO:0030247 polysaccharide binding IEP Predicted GO
CC GO:0031225 anchored component of membrane IEP Predicted GO
BP GO:0040007 growth IEP Predicted GO
BP GO:0043062 extracellular structure organization IEP Predicted GO
MF GO:1901505 carbohydrate derivative transmembrane transporter activity IEP Predicted GO
InterPro domains Description Start Stop
IPR000620 EamA_dom 190 323
IPR000620 EamA_dom 26 155
No external refs found!