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  5. Pp1s154_55V6

Pp1s154_55V6


Description : prp31 pre-mrna processing factor 31 homolog


Gene families : OG_42_0003326 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0003326_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Physcomitrella release: Pp1s154_55V6
Cluster HCCA clusters: Cluster_229

Target Alias Description ECC score Gene Family Method Actions
At1g70400 No alias CONTAINS InterPro DOMAIN/s: NOSIC (InterPro:IPR012976);... 0.02 Orthogroups_2024-Update
Brara.A02461.1 No alias component *(PRPF31) of spliceosomal U4/U6 snRNP 0.02 Orthogroups_2024-Update
Seita.5G465000.1 No alias component *(PRPF31) of spliceosomal U4/U6 snRNP 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004252 serine-type endopeptidase activity IEP Predicted GO
CC GO:0005667 transcription factor complex IEP Predicted GO
CC GO:0005669 transcription factor TFIID complex IEP Predicted GO
BP GO:0006352 DNA-templated transcription, initiation IEP Predicted GO
MF GO:0008236 serine-type peptidase activity IEP Predicted GO
MF GO:0015399 primary active transmembrane transporter activity IEP Predicted GO
MF GO:0015405 P-P-bond-hydrolysis-driven transmembrane transporter activity IEP Predicted GO
CC GO:0016021 integral component of membrane IEP Predicted GO
MF GO:0017171 serine hydrolase activity IEP Predicted GO
MF GO:0022804 active transmembrane transporter activity IEP Predicted GO
CC GO:0031224 intrinsic component of membrane IEP Predicted GO
MF GO:0042623 ATPase activity, coupled IEP Predicted GO
MF GO:0042626 ATPase activity, coupled to transmembrane movement of substances IEP Predicted GO
MF GO:0043492 ATPase activity, coupled to movement of substances IEP Predicted GO
CC GO:0044425 membrane part IEP Predicted GO
CC GO:0044428 nuclear part IEP Predicted GO
CC GO:0044451 nucleoplasm part IEP Predicted GO
CC GO:0044798 nuclear transcription factor complex IEP Predicted GO
CC GO:0090575 RNA polymerase II transcription factor complex IEP Predicted GO
InterPro domains Description Start Stop
IPR019175 Prp31_C 395 512
IPR002687 Nop_dom 159 387
No external refs found!