- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Description : at1g03950 f21m11_12
Gene families : OG_42_0001019 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001019_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Physcomitrella release: Pp1s156_55V6 | |
| Cluster | HCCA clusters: Cluster_195 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| 266789 | No alias | vacuolar protein sorting-associated protein 2.3 | 0.02 | Orthogroups_2024-Update | |
| Glyma.03G164800 | No alias | vacuolar protein sorting-associated protein 2.3 | 0.03 | Orthogroups_2024-Update | |
| Glyma.15G192100 | No alias | SNF7 family protein | 0.03 | Orthogroups_2024-Update | |
| Pp1s1_416V6 | No alias | at1g03950 f21m11_12 | 0.03 | Orthogroups_2024-Update | |
| Solyc02g069680 | No alias | Vacuolar protein sorting-associated protein 2 homolog 2... | 0.02 | Orthogroups_2024-Update |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0007034 | vacuolar transport | IEA | InterProScan predictions |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0000139 | Golgi membrane | IEP | Predicted GO |
| MF | GO:0000166 | nucleotide binding | IEP | Predicted GO |
| BP | GO:0006906 | vesicle fusion | IEP | Predicted GO |
| MF | GO:0008565 | protein transporter activity | IEP | Predicted GO |
| BP | GO:0010959 | regulation of metal ion transport | IEP | Predicted GO |
| MF | GO:0015035 | protein disulfide oxidoreductase activity | IEP | Predicted GO |
| MF | GO:0015036 | disulfide oxidoreductase activity | IEP | Predicted GO |
| BP | GO:0016050 | vesicle organization | IEP | Predicted GO |
| MF | GO:0016667 | oxidoreductase activity, acting on a sulfur group of donors | IEP | Predicted GO |
| CC | GO:0030176 | integral component of endoplasmic reticulum membrane | IEP | Predicted GO |
| CC | GO:0031090 | organelle membrane | IEP | Predicted GO |
| CC | GO:0031227 | intrinsic component of endoplasmic reticulum membrane | IEP | Predicted GO |
| BP | GO:0032879 | regulation of localization | IEP | Predicted GO |
| MF | GO:0034061 | DNA polymerase activity | IEP | Predicted GO |
| MF | GO:0036094 | small molecule binding | IEP | Predicted GO |
| BP | GO:0043269 | regulation of ion transport | IEP | Predicted GO |
| CC | GO:0044422 | organelle part | IEP | Predicted GO |
| CC | GO:0044431 | Golgi apparatus part | IEP | Predicted GO |
| CC | GO:0044432 | endoplasmic reticulum part | IEP | Predicted GO |
| CC | GO:0044446 | intracellular organelle part | IEP | Predicted GO |
| BP | GO:0048280 | vesicle fusion with Golgi apparatus | IEP | Predicted GO |
| BP | GO:0048284 | organelle fusion | IEP | Predicted GO |
| BP | GO:0051049 | regulation of transport | IEP | Predicted GO |
| MF | GO:0051287 | NAD binding | IEP | Predicted GO |
| BP | GO:0051924 | regulation of calcium ion transport | IEP | Predicted GO |
| BP | GO:0061024 | membrane organization | IEP | Predicted GO |
| BP | GO:0061025 | membrane fusion | IEP | Predicted GO |
| BP | GO:0090174 | organelle membrane fusion | IEP | Predicted GO |
| MF | GO:0097159 | organic cyclic compound binding | IEP | Predicted GO |
| CC | GO:0098588 | bounding membrane of organelle | IEP | Predicted GO |
| MF | GO:1901265 | nucleoside phosphate binding | IEP | Predicted GO |
| MF | GO:1901363 | heterocyclic compound binding | IEP | Predicted GO |
| BP | GO:2001256 | regulation of store-operated calcium entry | IEP | Predicted GO |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR005024 | Snf7_fam | 17 | 184 |
| No external refs found! |