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  5. Pp1s158_150V6

Pp1s158_150V6


Description : zinc finger (c3hc4-type ring finger) family protein


Gene families : OG_42_0000680 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000680_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Physcomitrella release: Pp1s158_150V6
Cluster HCCA clusters: Cluster_235

Target Alias Description ECC score Gene Family Method Actions
Bradi3g30040 No alias RING/U-box superfamily protein 0.02 Orthogroups_2024-Update
HORVU2Hr1G118640.3 No alias E3 ubiquitin ligase 0.02 Orthogroups_2024-Update
MA_20567g0010 No alias (at3g47160 : 328.0) RING/U-box superfamily protein;... 0.03 Orthogroups_2024-Update
Mp6g12970.1 No alias RING-HC-class E3 ligase 0.02 Orthogroups_2024-Update
Potri.008G181300 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
Sobic.003G393700.3 No alias E3 ubiquitin ligase 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003997 acyl-CoA oxidase activity IEP Predicted GO
MF GO:0004619 phosphoglycerate mutase activity IEP Predicted GO
MF GO:0004672 protein kinase activity IEP Predicted GO
CC GO:0005777 peroxisome IEP Predicted GO
BP GO:0006468 protein phosphorylation IEP Predicted GO
BP GO:0006635 fatty acid beta-oxidation IEP Predicted GO
BP GO:0009062 fatty acid catabolic process IEP Predicted GO
BP GO:0016042 lipid catabolic process IEP Predicted GO
BP GO:0016054 organic acid catabolic process IEP Predicted GO
BP GO:0016310 phosphorylation IEP Predicted GO
MF GO:0016634 oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor IEP Predicted GO
MF GO:0016866 intramolecular transferase activity IEP Predicted GO
MF GO:0016868 intramolecular transferase activity, phosphotransferases IEP Predicted GO
BP GO:0019395 fatty acid oxidation IEP Predicted GO
BP GO:0030258 lipid modification IEP Predicted GO
BP GO:0034440 lipid oxidation IEP Predicted GO
CC GO:0042579 microbody IEP Predicted GO
BP GO:0044242 cellular lipid catabolic process IEP Predicted GO
BP GO:0044282 small molecule catabolic process IEP Predicted GO
BP GO:0046395 carboxylic acid catabolic process IEP Predicted GO
MF GO:0046537 2,3-bisphosphoglycerate-independent phosphoglycerate mutase activity IEP Predicted GO
BP GO:0072329 monocarboxylic acid catabolic process IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!