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  5. Solyc11g013300

Solyc11g013300


Description : Pathogenesis-related thaumatin family protein (AHRD V3.3 *** G7K8X4_MEDTR)


Gene families : OG_42_0000045 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000045_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc11g013300
Cluster HCCA clusters: Cluster_190

Target Alias Description ECC score Gene Family Method Actions
426298 No alias Pathogenesis-related thaumatin superfamily protein 0.02 Orthogroups_2024-Update
At1g75050 No alias Pathogenesis-related thaumatin superfamily protein... 0.03 Orthogroups_2024-Update
Bradi4g36410 No alias Pathogenesis-related thaumatin superfamily protein 0.03 Orthogroups_2024-Update
Glyma.12G238900 No alias thaumatin-like protein 3 0.03 Orthogroups_2024-Update
LOC_Os08g40600 No alias thaumatin, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os10g05600 No alias thaumatin-like protein 1 precursor, putative, expressed 0.02 Orthogroups_2024-Update
PSME_00032520-RA No alias (p33679|zeam_maize : 275.0) Zeamatin precursor - Zea... 0.03 Orthogroups_2024-Update
PSME_00036862-RA No alias (at4g11650 : 224.0) osmotin-like protein; osmotin 34... 0.03 Orthogroups_2024-Update
PSME_00045279-RA No alias (at1g19320 : 311.0) Pathogenesis-related thaumatin... 0.03 Orthogroups_2024-Update
PSME_00054893-RA No alias (at1g19320 : 169.0) Pathogenesis-related thaumatin... 0.03 Orthogroups_2024-Update
Potri.012G047800 No alias Pathogenesis-related thaumatin superfamily protein 0.03 Orthogroups_2024-Update
Solyc10g084840 No alias Pathogenesis-related thaumatin family protein (AHRD V3.3... 0.05 Orthogroups_2024-Update
Sopen08g028910 No alias Thaumatin family 0.05 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0001871 pattern binding IEP Predicted GO
BP GO:0015988 energy coupled proton transmembrane transport, against electrochemical gradient IEP Predicted GO
BP GO:0015991 ATP hydrolysis coupled proton transport IEP Predicted GO
MF GO:0030247 polysaccharide binding IEP Predicted GO
CC GO:0033177 proton-transporting two-sector ATPase complex, proton-transporting domain IEP Predicted GO
CC GO:0033179 proton-transporting V-type ATPase, V0 domain IEP Predicted GO
BP GO:0090662 ATP hydrolysis coupled transmembrane transport IEP Predicted GO
BP GO:0099131 ATP hydrolysis coupled ion transmembrane transport IEP Predicted GO
BP GO:0099132 ATP hydrolysis coupled cation transmembrane transport IEP Predicted GO
InterPro domains Description Start Stop
IPR001938 Thaumatin 35 239
No external refs found!