Pp1s15_200V6

Description : nac domain ipr003441

Gene families : OG_42_0000084 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000084_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Physcomitrella release: Pp1s15_200V6
Cluster	HCCA clusters: Cluster_24

Target	Alias	Description	ECC score	Gene Family Method
Glyma.08G009700	No alias	NAC domain containing protein 83	0.05	Orthogroups_2024-Update
LOC_Os11g03300	No alias	NAC domain transcription factor, putative, expressed	0.02	Orthogroups_2024-Update
Pp1s164_25V6	No alias	nac domain ipr003441	0.02	Orthogroups_2024-Update
Seita.8G008100.1	No alias	NAC-type transcription factor	0.02	Orthogroups_2024-Update
Sobic.003G382300.1	No alias	NAC-type transcription factor	0.02	Orthogroups_2024-Update
Sopen03g028400	No alias	No apical meristem (NAM) protein	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	InterProScan predictions
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	InterProScan predictions
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
CC	GO:0005783	endoplasmic reticulum	IEP	Predicted GO
CC	GO:0043226	organelle	IEP	Predicted GO
CC	GO:0043229	intracellular organelle	IEP	Predicted GO
CC	GO:0044444	cytoplasmic part	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR003441	NAC-dom	14	140

External Links

No external refs found!

Pp1s15_200V6

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation