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  5. Pp1s15_409V6

Pp1s15_409V6


Description : photosystem ii 10 kda polypeptide


Gene families : OG_42_0002845 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002845_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Physcomitrella release: Pp1s15_409V6
Cluster HCCA clusters: Cluster_101

Target Alias Description ECC score Gene Family Method Actions
231914 No alias photosystem II subunit R 0.05 Orthogroups_2024-Update
A4A49_01941 No alias photosystem ii 10 kda polypeptide, chloroplastic 0.04 Orthogroups_2024-Update
A4A49_20557 No alias photosystem ii 10 kda polypeptide, chloroplastic 0.04 Orthogroups_2024-Update
Cre06.g261000 No alias photosystem II subunit R 0.04 Orthogroups_2024-Update
Glyma.08G173700 No alias photosystem II subunit R 0.05 Orthogroups_2024-Update
Glyma.15G253700 No alias photosystem II subunit R 0.05 Orthogroups_2024-Update
Kfl00098_0060 kfl00098_0060_v1.1 (q40070|psbr_horvu : 102.0) Photosystem II 10 kDa... 0.03 Orthogroups_2024-Update
MA_282g0010 No alias (p06183|psbr_soltu : 160.0) Photosystem II 10 kDa... 0.05 Orthogroups_2024-Update
Mp3g05840.1 No alias component PsbR of PS-II complex 0.06 Orthogroups_2024-Update
Seita.6G032200.1 No alias component *(PsbR) of PS-II complex 0.07 Orthogroups_2024-Update
Sobic.007G071500.1 No alias component *(PsbR) of PS-II complex 0.09 Orthogroups_2024-Update
Solyc07g066310 No alias Photosystem II 10 kDa polypeptide family protein (AHRD... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0009523 photosystem II IEA InterProScan predictions
CC GO:0009654 photosystem II oxygen evolving complex IEA InterProScan predictions
BP GO:0015979 photosynthesis IEA InterProScan predictions
CC GO:0042651 thylakoid membrane IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0001505 regulation of neurotransmitter levels IEP Predicted GO
MF GO:0004375 glycine dehydrogenase (decarboxylating) activity IEP Predicted GO
MF GO:0004497 monooxygenase activity IEP Predicted GO
MF GO:0005507 copper ion binding IEP Predicted GO
BP GO:0006544 glycine metabolic process IEP Predicted GO
BP GO:0006546 glycine catabolic process IEP Predicted GO
BP GO:0006814 sodium ion transport IEP Predicted GO
MF GO:0008942 nitrite reductase [NAD(P)H] activity IEP Predicted GO
MF GO:0009055 electron transfer activity IEP Predicted GO
BP GO:0009063 cellular amino acid catabolic process IEP Predicted GO
BP GO:0009069 serine family amino acid metabolic process IEP Predicted GO
BP GO:0009071 serine family amino acid catabolic process IEP Predicted GO
MF GO:0009496 plastoquinol--plastocyanin reductase activity IEP Predicted GO
CC GO:0009507 chloroplast IEP Predicted GO
CC GO:0009522 photosystem I IEP Predicted GO
CC GO:0009536 plastid IEP Predicted GO
CC GO:0009538 photosystem I reaction center IEP Predicted GO
BP GO:0010109 regulation of photosynthesis IEP Predicted GO
BP GO:0010207 photosystem II assembly IEP Predicted GO
MF GO:0010242 oxygen evolving activity IEP Predicted GO
MF GO:0010277 chlorophyllide a oxygenase [overall] activity IEP Predicted GO
BP GO:0016054 organic acid catabolic process IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors IEP Predicted GO
MF GO:0016642 oxidoreductase activity, acting on the CH-NH2 group of donors, disulfide as acceptor IEP Predicted GO
MF GO:0016661 oxidoreductase activity, acting on other nitrogenous compounds as donors IEP Predicted GO
MF GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors IEP Predicted GO
MF GO:0016703 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases) IEP Predicted GO
CC GO:0019898 extrinsic component of membrane IEP Predicted GO
BP GO:0030001 metal ion transport IEP Predicted GO
BP GO:0042133 neurotransmitter metabolic process IEP Predicted GO
BP GO:0042135 neurotransmitter catabolic process IEP Predicted GO
BP GO:0042548 regulation of photosynthesis, light reaction IEP Predicted GO
BP GO:0042549 photosystem II stabilization IEP Predicted GO
BP GO:0042737 drug catabolic process IEP Predicted GO
BP GO:0043467 regulation of generation of precursor metabolites and energy IEP Predicted GO
BP GO:0044282 small molecule catabolic process IEP Predicted GO
BP GO:0046395 carboxylic acid catabolic process IEP Predicted GO
MF GO:0046857 oxidoreductase activity, acting on other nitrogenous compounds as donors, with NAD or NADP as acceptor IEP Predicted GO
MF GO:0048037 cofactor binding IEP Predicted GO
MF GO:0051536 iron-sulfur cluster binding IEP Predicted GO
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP Predicted GO
MF GO:0051540 metal cluster binding IEP Predicted GO
MF GO:0052880 oxidoreductase activity, acting on diphenols and related substances as donors, with copper protein as acceptor IEP Predicted GO
BP GO:0055114 oxidation-reduction process IEP Predicted GO
MF GO:0098809 nitrite reductase activity IEP Predicted GO
BP GO:1901606 alpha-amino acid catabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR006814 PSII_PsbR 51 146
No external refs found!