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  5. Pp1s161_107V6

Pp1s161_107V6


Description : T7P1.24; expressed protein [Arabidopsis thaliana]


Gene families : OG_42_0000690 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000690_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Physcomitrella release: Pp1s161_107V6
Cluster HCCA clusters: Cluster_47

Target Alias Description ECC score Gene Family Method Actions
266989 No alias Protein of unknown function (DUF1218) 0.04 Orthogroups_2024-Update
At1g61065 No alias 1,3-beta-glucan synthase component (DUF1218)... 0.06 Orthogroups_2024-Update
GRMZM2G360615 No alias Protein of unknown function (DUF1218) 0.02 Orthogroups_2024-Update
Glyma.08G261800 No alias Protein of unknown function (DUF1218) 0.04 Orthogroups_2024-Update
LOC_Os04g58160 No alias fiber protein Fb34, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os07g27810 No alias fiber protein Fb34, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os08g16130 No alias fiber protein Fb34, putative, expressed 0.01 Orthogroups_2024-Update
MA_10429894g0010 No alias (at1g52910 : 197.0) Protein of unknown function... 0.02 Orthogroups_2024-Update
PSME_00036797-RA No alias (at1g61065 : 151.0) Protein of unknown function... 0.03 Orthogroups_2024-Update
Potri.004G038700 No alias Protein of unknown function (DUF1218) 0.03 Orthogroups_2024-Update
Potri.008G120900 No alias Protein of unknown function (DUF1218) 0.03 Orthogroups_2024-Update
Pp1s53_128V6 No alias No description available 0.03 Orthogroups_2024-Update
Pp1s72_280V6 No alias No description available 0.04 Orthogroups_2024-Update
Seita.2G127400.1 No alias regulatory protein *(TVA) of cellulose synthase complex... 0.05 Orthogroups_2024-Update
Sobic.010G144900.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Solyc07g063340 No alias Fiber protein Fb34 (AHRD V3.3 *** A0A0A0L071_CUCSA) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Predicted GO
MF GO:0004568 chitinase activity IEP Predicted GO
MF GO:0005096 GTPase activator activity IEP Predicted GO
MF GO:0005515 protein binding IEP Predicted GO
BP GO:0005975 carbohydrate metabolic process IEP Predicted GO
BP GO:0006022 aminoglycan metabolic process IEP Predicted GO
BP GO:0006026 aminoglycan catabolic process IEP Predicted GO
BP GO:0006030 chitin metabolic process IEP Predicted GO
BP GO:0006032 chitin catabolic process IEP Predicted GO
BP GO:0006040 amino sugar metabolic process IEP Predicted GO
MF GO:0015095 magnesium ion transmembrane transporter activity IEP Predicted GO
BP GO:0015693 magnesium ion transport IEP Predicted GO
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Predicted GO
BP GO:0016998 cell wall macromolecule catabolic process IEP Predicted GO
CC GO:0030118 clathrin coat IEP Predicted GO
CC GO:0030125 clathrin vesicle coat IEP Predicted GO
CC GO:0030130 clathrin coat of trans-Golgi network vesicle IEP Predicted GO
CC GO:0030132 clathrin coat of coated pit IEP Predicted GO
BP GO:0042737 drug catabolic process IEP Predicted GO
MF GO:0043565 sequence-specific DNA binding IEP Predicted GO
BP GO:0044036 cell wall macromolecule metabolic process IEP Predicted GO
CC GO:0044459 plasma membrane part IEP Predicted GO
BP GO:0046348 amino sugar catabolic process IEP Predicted GO
BP GO:0070838 divalent metal ion transport IEP Predicted GO
BP GO:0072511 divalent inorganic cation transport IEP Predicted GO
CC GO:0098797 plasma membrane protein complex IEP Predicted GO
BP GO:1901071 glucosamine-containing compound metabolic process IEP Predicted GO
BP GO:1901072 glucosamine-containing compound catabolic process IEP Predicted GO
BP GO:1901136 carbohydrate derivative catabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR009606 DUF1218 61 156
No external refs found!