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  5. Pp1s162_103V6

Pp1s162_103V6


Description : hypothetical protein [Oryza sativa (japonica cultivar-group)]


Gene families : OG_42_0000001 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Physcomitrella release: Pp1s162_103V6
Cluster HCCA clusters: Cluster_276

Target Alias Description ECC score Gene Family Method Actions
At1g74600 No alias Pentatricopeptide repeat-containing protein At1g74600,... 0.02 Orthogroups_2024-Update
At3g14330 No alias Pentatricopeptide repeat-containing protein At3g14330... 0.02 Orthogroups_2024-Update
At5g52630 No alias Putative pentatricopeptide repeat-containing protein... 0.03 Orthogroups_2024-Update
Bradi2g11440 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 Orthogroups_2024-Update
GRMZM2G030148 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 Orthogroups_2024-Update
GRMZM2G076257 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.02 Orthogroups_2024-Update
Glyma.11G008800 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.02 Orthogroups_2024-Update
Glyma.12G001100 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.02 Orthogroups_2024-Update
Glyma.17G209700 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 Orthogroups_2024-Update
HORVU2Hr1G035330.2 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU3Hr1G085770.2 No alias RNA editing factor *(CRR2) 0.02 Orthogroups_2024-Update
MA_108139g0010 No alias (at4g13650 : 629.0) Pentatricopeptide repeat (PPR)... 0.02 Orthogroups_2024-Update
Seita.2G001800.1 No alias RNA editing factor *(ELI1) 0.02 Orthogroups_2024-Update
Solyc11g065250 No alias Pentatricopeptide repeat superfamily protein (AHRD V3.3... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006644 phospholipid metabolic process IEP Predicted GO
BP GO:0006650 glycerophospholipid metabolic process IEP Predicted GO
MF GO:0015095 magnesium ion transmembrane transporter activity IEP Predicted GO
BP GO:0015693 magnesium ion transport IEP Predicted GO
CC GO:0016021 integral component of membrane IEP Predicted GO
BP GO:0030258 lipid modification IEP Predicted GO
CC GO:0031224 intrinsic component of membrane IEP Predicted GO
CC GO:0044425 membrane part IEP Predicted GO
BP GO:0046486 glycerolipid metabolic process IEP Predicted GO
BP GO:0046488 phosphatidylinositol metabolic process IEP Predicted GO
BP GO:0046834 lipid phosphorylation IEP Predicted GO
BP GO:0046854 phosphatidylinositol phosphorylation IEP Predicted GO
BP GO:0070838 divalent metal ion transport IEP Predicted GO
BP GO:0072511 divalent inorganic cation transport IEP Predicted GO
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 399 446
IPR002885 Pentatricopeptide_repeat 703 748
IPR002885 Pentatricopeptide_repeat 298 343
IPR002885 Pentatricopeptide_repeat 196 243
IPR002885 Pentatricopeptide_repeat 602 649
IPR002885 Pentatricopeptide_repeat 501 546
No external refs found!