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Description : mikc* mads-box transcription factor
Gene families : OG_42_0000009 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Physcomitrella release: Pp1s163_73V6 | |
| Cluster | HCCA clusters: Cluster_111 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| A4A49_18078 | No alias | developmental protein sepallata 1 | 0.03 | Orthogroups_2024-Update | |
| A4A49_19521 | No alias | developmental protein sepallata 1 | 0.02 | Orthogroups_2024-Update | |
| A4A49_22632 | No alias | floral homeotic protein agamous | 0.02 | Orthogroups_2024-Update | |
| At1g01530 | No alias | AGL28 [Source:UniProtKB/TrEMBL;Acc:A0A178WE04] | 0.02 | Orthogroups_2024-Update | |
| At2g42830 | No alias | K-box region and MADS-box transcription factor family... | 0.02 | Orthogroups_2024-Update | |
| At4g11880 | No alias | Agamous-like MADS-box protein AGL14... | 0.03 | Orthogroups_2024-Update | |
| At5g51860 | No alias | MADS-box protein AGL72 [Source:UniProtKB/Swiss-Prot;Acc:Q9FLH5] | 0.03 | Orthogroups_2024-Update | |
| Bradi3g32090 | No alias | AGAMOUS-like 20 | 0.03 | Orthogroups_2024-Update | |
| Brara.J01932.1 | No alias | regulatory protein *(SEPALLATA) of floral meristem... | 0.04 | Orthogroups_2024-Update | |
| Brara.K00198.1 | No alias | MADS/AGL-type transcription factor | 0.02 | Orthogroups_2024-Update | |
| GRMZM2G133568 | No alias | AGAMOUS-like 16 | 0.02 | Orthogroups_2024-Update | |
| Glyma.01G020500 | No alias | AGAMOUS-like 21 | 0.03 | Orthogroups_2024-Update | |
| Glyma.01G064100 | No alias | K-box region and MADS-box transcription factor family protein | 0.02 | Orthogroups_2024-Update | |
| Glyma.05G227300 | No alias | AGAMOUS-like 62 | 0.03 | Orthogroups_2024-Update | |
| Glyma.08G105500 | No alias | K-box region and MADS-box transcription factor family protein | 0.03 | Orthogroups_2024-Update | |
| Glyma.10G084700 | No alias | AGAMOUS-like 62 | 0.02 | Orthogroups_2024-Update | |
| Glyma.10G085600 | No alias | AGAMOUS-like 62 | 0.02 | Orthogroups_2024-Update | |
| Glyma.13G034100 | No alias | K-box region and MADS-box transcription factor family protein | 0.02 | Orthogroups_2024-Update | |
| Glyma.15G088600 | No alias | K-box region and MADS-box transcription factor family protein | 0.02 | Orthogroups_2024-Update | |
| HORVU0Hr1G003020.3 | No alias | regulatory protein *(AP1/CAL/FUL) of floral meristem... | 0.02 | Orthogroups_2024-Update | |
| HORVU6Hr1G002270.1 | No alias | MADS/AGL-type transcription factor | 0.03 | Orthogroups_2024-Update | |
| LOC_Os05g11414 | No alias | OsMADS58 - MADS-box family gene with MIKCc type-box, expressed | 0.02 | Orthogroups_2024-Update | |
| MA_101463g0010 | No alias | (q9xj60|mad50_orysa : 102.0) MADS-box transcription... | 0.02 | Orthogroups_2024-Update | |
| MA_35712g0010 | No alias | (at4g11880 : 102.0) AGL12, AGL14, and AGL17 are all... | 0.02 | Orthogroups_2024-Update | |
| Potri.001G284301 | No alias | AGAMOUS-like 21 | 0.03 | Orthogroups_2024-Update | |
| Seita.1G308200.1 | No alias | MADS/AGL-type transcription factor | 0.02 | Orthogroups_2024-Update | |
| Seita.2G266600.1 | No alias | regulatory protein *(SEPALLATA) of floral meristem... | 0.03 | Orthogroups_2024-Update | |
| Seita.3G280400.1 | No alias | MADS/AGL-type transcription factor | 0.05 | Orthogroups_2024-Update | |
| Seita.4G160200.1 | No alias | MADS/AGL-type transcription factor | 0.02 | Orthogroups_2024-Update | |
| Seita.6G194800.1 | No alias | MADS/AGL-type transcription factor | 0.02 | Orthogroups_2024-Update | |
| Solyc01g106730 | No alias | MADS-box transcription factor family protein (AHRD V3.3... | 0.02 | Orthogroups_2024-Update | |
| Solyc08g067230 | No alias | MADS box transcription factor (AHRD V3.3 *** G3EIU8_9SOLA) | 0.02 | Orthogroups_2024-Update |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003677 | DNA binding | IEA | InterProScan predictions |
| MF | GO:0046983 | protein dimerization activity | IEA | InterProScan predictions |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003839 | gamma-glutamylcyclotransferase activity | IEP | Predicted GO |
| CC | GO:0005730 | nucleolus | IEP | Predicted GO |
| BP | GO:0006575 | cellular modified amino acid metabolic process | IEP | Predicted GO |
| BP | GO:0006749 | glutathione metabolic process | IEP | Predicted GO |
| BP | GO:0006751 | glutathione catabolic process | IEP | Predicted GO |
| BP | GO:0006790 | sulfur compound metabolic process | IEP | Predicted GO |
| MF | GO:0016840 | carbon-nitrogen lyase activity | IEP | Predicted GO |
| MF | GO:0016842 | amidine-lyase activity | IEP | Predicted GO |
| MF | GO:0030599 | pectinesterase activity | IEP | Predicted GO |
| BP | GO:0042219 | cellular modified amino acid catabolic process | IEP | Predicted GO |
| BP | GO:0042545 | cell wall modification | IEP | Predicted GO |
| BP | GO:0043171 | peptide catabolic process | IEP | Predicted GO |
| BP | GO:0044273 | sulfur compound catabolic process | IEP | Predicted GO |
| BP | GO:0045229 | external encapsulating structure organization | IEP | Predicted GO |
| BP | GO:0051187 | cofactor catabolic process | IEP | Predicted GO |
| BP | GO:0071555 | cell wall organization | IEP | Predicted GO |
| BP | GO:1901565 | organonitrogen compound catabolic process | IEP | Predicted GO |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR002100 | TF_MADSbox | 10 | 57 |
| No external refs found! |