1. Home
  2. Species
  3. Physcomitrella patens
  4. Sequence
  5. Pp1s163_96V6

Pp1s163_96V6


Description : dead box atp-dependent rna


Gene families : OG_42_0000844 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000844_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Physcomitrella release: Pp1s163_96V6
Cluster HCCA clusters: Cluster_241

Target Alias Description ECC score Gene Family Method Actions
GRMZM2G565140 No alias putative mitochondrial RNA helicase 2 0.02 Orthogroups_2024-Update
Potri.006G024100 No alias putative mitochondrial RNA helicase 2 0.02 Orthogroups_2024-Update
Sopen03g003010 No alias DEAD/DEAH box helicase 0.02 Orthogroups_2024-Update
evm.model.contig_3385.6 No alias (at5g26742 : 365.0) embryo defective 1138 (emb1138);... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA InterProScan predictions
MF GO:0003723 RNA binding IEA InterProScan predictions
MF GO:0004386 helicase activity IEA InterProScan predictions
MF GO:0005524 ATP binding IEA InterProScan predictions
CC GO:0005634 nucleus IEA InterProScan predictions
MF GO:0008270 zinc ion binding IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR011545 DEAD/DEAH_box_helicase_dom 142 314
IPR001650 Helicase_C 351 459
IPR012562 GUCT 546 643
IPR001878 Znf_CCHC 717 733
No external refs found!