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  5. Pp1s164_20V6

Pp1s164_20V6


Description : histone h3


Gene families : OG_42_0000090 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000090_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Physcomitrella release: Pp1s164_20V6
Cluster HCCA clusters: Cluster_228

Target Alias Description ECC score Gene Family Method Actions
Brara.B00354.1 No alias histone *(H3) 0.01 Orthogroups_2024-Update
Brara.C00447.1 No alias histone *(H3) 0.01 Orthogroups_2024-Update
Brara.I01745.1 No alias histone *(H3) 0.02 Orthogroups_2024-Update
Brara.I05605.1 No alias histone H3 variant *(CENH3) 0.04 Orthogroups_2024-Update
PSME_00001054-RA No alias (at5g10980 : 114.0) Histone superfamily protein;... 0.07 Orthogroups_2024-Update
Solyc01g073970 No alias Histone H3 (AHRD V3.3 *** A0A068VC55_COFCA) 0.03 Orthogroups_2024-Update
Solyc01g079110 No alias Histone H3 (AHRD V3.3 *** A0A0V0H170_SOLCH) 0.01 Orthogroups_2024-Update
Solyc01g086820 No alias Histone H3 (AHRD V3.3 *** A0A068VC55_COFCA) 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEA InterProScan predictions
MF GO:0003677 DNA binding IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR007125 Histone_H2A/H2B/H3 1 132
No external refs found!