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  5. Pp1s166_30V6

Pp1s166_30V6


No description available


Gene families : OG_42_0000883 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000883_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Physcomitrella release: Pp1s166_30V6
Cluster HCCA clusters: Cluster_247

Target Alias Description ECC score Gene Family Method Actions
GRMZM2G172065 No alias RING/U-box superfamily protein 0.02 Orthogroups_2024-Update
Glyma.13G092000 No alias RING/U-box superfamily protein 0.02 Orthogroups_2024-Update
HORVU7Hr1G027080.2 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.02 Orthogroups_2024-Update
LOC_Os08g34550 No alias RING-H2 finger protein, putative, expressed 0.02 Orthogroups_2024-Update
MA_10435495g0010 No alias (at4g30400 : 213.0) RING/U-box superfamily protein;... 0.02 Orthogroups_2024-Update
Solyc07g006360 No alias RING/U-box superfamily protein (AHRD V3.3 *** AT4G30400.1) 0.03 Orthogroups_2024-Update
Sopen02g031800 No alias Ring finger domain 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003779 actin binding IEP Predicted GO
BP GO:0006891 intra-Golgi vesicle-mediated transport IEP Predicted GO
BP GO:0007010 cytoskeleton organization IEP Predicted GO
MF GO:0008483 transaminase activity IEP Predicted GO
MF GO:0009982 pseudouridine synthase activity IEP Predicted GO
BP GO:0016192 vesicle-mediated transport IEP Predicted GO
MF GO:0016624 oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor IEP Predicted GO
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP Predicted GO
CC GO:0017119 Golgi transport complex IEP Predicted GO
CC GO:0044431 Golgi apparatus part IEP Predicted GO
BP GO:0048193 Golgi vesicle transport IEP Predicted GO
CC GO:0099023 tethering complex IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!