Pp1s169_171V6

Description : cycling dof factor 2

Gene families : OG_42_0000027 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000027_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Physcomitrella release: Pp1s169_171V6
Cluster	HCCA clusters: Cluster_142

Target	Alias	Description	ECC score	Gene Family Method
At1g47655	No alias	Dof zinc finger protein DOF1.6...	0.02	Orthogroups_2024-Update
Bradi1g17410	No alias	cycling DOF factor 3	0.02	Orthogroups_2024-Update
Bradi2g09720	No alias	cycling DOF factor 2	0.03	Orthogroups_2024-Update
Bradi2g62380	No alias	OBF-binding protein 3	0.02	Orthogroups_2024-Update
Brara.G01458.1	No alias	transcription factor *(DOF)	0.02	Orthogroups_2024-Update
Brara.G02891.1	No alias	transcription factor *(DOF)	0.04	Orthogroups_2024-Update
Glyma.13G352000	No alias	DOF zinc finger protein 1	0.04	Orthogroups_2024-Update
Glyma.15G039300	No alias	OBF-binding protein 3	0.02	Orthogroups_2024-Update
Glyma.18G289700	No alias	OBF-binding protein 3	0.02	Orthogroups_2024-Update
HORVU1Hr1G074140.1	No alias	transcription factor *(DOF)	0.03	Orthogroups_2024-Update
HORVU2Hr1G017290.1	No alias	transcription factor *(DOF)	0.02	Orthogroups_2024-Update
LOC_Os01g15900	No alias	expressed protein	0.02	Orthogroups_2024-Update
LOC_Os07g48570	No alias	expressed protein	0.02	Orthogroups_2024-Update
Mp2g20790.1	No alias	transcription factor (DOF)	0.02	Orthogroups_2024-Update
PSME_00041316-RA	No alias	(at5g39660 : 139.0) Dof-type zinc finger...	0.02	Orthogroups_2024-Update
Potri.004G038800	No alias	OBF binding protein 4	0.02	Orthogroups_2024-Update
Potri.004G121800	No alias	cycling DOF factor 2	0.02	Orthogroups_2024-Update
Potri.015G009300	No alias	Dof-type zinc finger DNA-binding family protein	0.03	Orthogroups_2024-Update
Seita.9G206300.1	No alias	transcription factor *(DOF)	0.02	Orthogroups_2024-Update
Sobic.003G253200.1	No alias	transcription factor *(DOF)	0.02	Orthogroups_2024-Update
Sobic.003G301700.1	No alias	transcription factor *(DOF)	0.02	Orthogroups_2024-Update
Solyc02g067230	No alias	Dof zinc finger protein3	0.02	Orthogroups_2024-Update
Solyc05g007880	No alias	Dof zinc finger protein (AHRD V3.3 *** W9S8B0_9ROSA)	0.02	Orthogroups_2024-Update
Sopen02g021750	No alias	Dof domain, zinc finger	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	InterProScan predictions
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	InterProScan predictions
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004619	phosphoglycerate mutase activity	IEP	Predicted GO
MF	GO:0005215	transporter activity	IEP	Predicted GO
BP	GO:0006006	glucose metabolic process	IEP	Predicted GO
BP	GO:0006007	glucose catabolic process	IEP	Predicted GO
BP	GO:0006810	transport	IEP	Predicted GO
BP	GO:0006811	ion transport	IEP	Predicted GO
BP	GO:0006812	cation transport	IEP	Predicted GO
MF	GO:0008113	peptide-methionine (S)-S-oxide reductase activity	IEP	Predicted GO
MF	GO:0008324	cation transmembrane transporter activity	IEP	Predicted GO
MF	GO:0008519	ammonium transmembrane transporter activity	IEP	Predicted GO
BP	GO:0009719	response to endogenous stimulus	IEP	Predicted GO
BP	GO:0009725	response to hormone	IEP	Predicted GO
BP	GO:0009733	response to auxin	IEP	Predicted GO
BP	GO:0010033	response to organic substance	IEP	Predicted GO
MF	GO:0015075	ion transmembrane transporter activity	IEP	Predicted GO
BP	GO:0015696	ammonium transport	IEP	Predicted GO
BP	GO:0016226	iron-sulfur cluster assembly	IEP	Predicted GO
MF	GO:0016671	oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	IEP	Predicted GO
MF	GO:0016866	intramolecular transferase activity	IEP	Predicted GO
MF	GO:0016868	intramolecular transferase activity, phosphotransferases	IEP	Predicted GO
BP	GO:0019320	hexose catabolic process	IEP	Predicted GO
MF	GO:0022857	transmembrane transporter activity	IEP	Predicted GO
MF	GO:0030145	manganese ion binding	IEP	Predicted GO
BP	GO:0031163	metallo-sulfur cluster assembly	IEP	Predicted GO
BP	GO:0044282	small molecule catabolic process	IEP	Predicted GO
BP	GO:0046365	monosaccharide catabolic process	IEP	Predicted GO
BP	GO:0051179	localization	IEP	Predicted GO
BP	GO:0051234	establishment of localization	IEP	Predicted GO
BP	GO:0055085	transmembrane transport	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR003851	Znf_Dof	56	111

External Links

No external refs found!

Pp1s169_171V6

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation