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  5. Pp1s16_322V6

Pp1s16_322V6


Description : rubisco subunit binding-protein alpha subunit


Gene families : OG_42_0000358 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000358_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Physcomitrella release: Pp1s16_322V6
Cluster HCCA clusters: Cluster_15

Target Alias Description ECC score Gene Family Method Actions
At1g55490 No alias LEN1 [Source:UniProtKB/TrEMBL;Acc:A0A178W724] 0.02 Orthogroups_2024-Update
At3g23990 No alias Chaperonin CPN60, mitochondrial... 0.02 Orthogroups_2024-Update
Bradi1g50270 No alias chaperonin 60 beta 0.02 Orthogroups_2024-Update
Bradi1g75520 No alias heat shock protein 60 0.03 Orthogroups_2024-Update
Bradi5g02890 No alias chaperonin-60alpha 0.02 Orthogroups_2024-Update
Bradi5g11240 No alias TCP-1/cpn60 chaperonin family protein 0.02 Orthogroups_2024-Update
Brara.C02414.1 No alias subunit alpha of Cpn60 chaperonin complex & subunit... 0.03 Orthogroups_2024-Update
Brara.D01674.1 No alias subunit alpha of Cpn60 chaperonin complex & subunit... 0.03 Orthogroups_2024-Update
Brara.G01341.1 No alias subunit alpha of Cpn60 chaperonin complex & subunit... 0.03 Orthogroups_2024-Update
Brara.H00053.1 No alias chaperone *(Hsp60) & subunit beta of Cpn60 chaperonin... 0.05 Orthogroups_2024-Update
Cre04.g231222 No alias chaperonin-60alpha 0.04 Orthogroups_2024-Update
Cre06.g309100 No alias heat shock protein 60 0.01 Orthogroups_2024-Update
Cre07.g339150 No alias TCP-1/cpn60 chaperonin family protein 0.02 Orthogroups_2024-Update
Cre17.g741450 No alias chaperonin 60 beta 0.04 Orthogroups_2024-Update
GRMZM2G083716 No alias chaperonin 60 beta 0.02 Orthogroups_2024-Update
HORVU1Hr1G079910.6 No alias chaperone *(Hsp60) 0.02 Orthogroups_2024-Update
HORVU2Hr1G007840.7 No alias subunit alpha of Cpn60 chaperonin complex & subunit... 0.05 Orthogroups_2024-Update
HORVU4Hr1G078820.3 No alias chaperone *(Hsp60) 0.03 Orthogroups_2024-Update
HORVU7Hr1G006490.2 No alias chaperone *(Hsp60) & subunit beta of CPN60 assembly... 0.02 Orthogroups_2024-Update
Kfl00292_0140 kfl00292_0140_v1.1 (q05046|ch62_cucma : 837.0) Chaperonin CPN60-2,... 0.02 Orthogroups_2024-Update
LOC_Os12g17910 No alias T-complex protein, putative, expressed 0.03 Orthogroups_2024-Update
MA_97627g0010 No alias (p08927|rubb_pea : 646.0) RuBisCO large subunit-binding... 0.03 Orthogroups_2024-Update
Mp1g21640.1 No alias subunit beta of Cpn60 chaperonin complex. component... 0.03 Orthogroups_2024-Update
PSME_00000537-RA No alias (p21239|rub1_brana : 764.0) RuBisCO large... 0.02 Orthogroups_2024-Update
Potri.001G054400 No alias heat shock protein 60 0.02 Orthogroups_2024-Update
Potri.003G222400 No alias TCP-1/cpn60 chaperonin family protein 0.03 Orthogroups_2024-Update
Potri.004G213400 No alias chaperonin-60alpha 0.04 Orthogroups_2024-Update
Pp1s14_298V6 No alias ru large subunit-binding protein subunit beta 0.02 Orthogroups_2024-Update
Seita.9G543300.1 No alias chaperone *(Hsp60) 0.02 Orthogroups_2024-Update
Solyc01g028810 No alias Chaperonin-60 beta subunit (AHRD V3.3 *** P93570_SOLTU) 0.02 Orthogroups_2024-Update
Solyc09g091180 No alias Chaperonin CPN60, mitochondrial (AHRD V3.3 *** CH60A_ARATH) 0.02 Orthogroups_2024-Update
Sopen09g034150 No alias TCP-1/cpn60 chaperonin family 0.02 Orthogroups_2024-Update
evm.model.tig00001107.20 No alias (q42694|ruba_chlre : 473.0) RuBisCO large... 0.02 Orthogroups_2024-Update
evm.model.tig00001269.7 No alias (q05046|ch62_cucma : 728.0) Chaperonin CPN60-2,... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0001671 ATPase activator activity IEP Predicted GO
MF GO:0001882 nucleoside binding IEP Predicted GO
MF GO:0001883 purine nucleoside binding IEP Predicted GO
MF GO:0003676 nucleic acid binding IEP Predicted GO
MF GO:0003723 RNA binding IEP Predicted GO
MF GO:0003746 translation elongation factor activity IEP Predicted GO
MF GO:0003824 catalytic activity IEP Predicted GO
MF GO:0003924 GTPase activity IEP Predicted GO
MF GO:0004325 ferrochelatase activity IEP Predicted GO
MF GO:0004356 glutamate-ammonia ligase activity IEP Predicted GO
MF GO:0005525 GTP binding IEP Predicted GO
CC GO:0005622 intracellular IEP Predicted GO
BP GO:0006355 regulation of transcription, DNA-templated IEP Predicted GO
BP GO:0006414 translational elongation IEP Predicted GO
BP GO:0006541 glutamine metabolic process IEP Predicted GO
BP GO:0006542 glutamine biosynthetic process IEP Predicted GO
BP GO:0006753 nucleoside phosphate metabolic process IEP Predicted GO
BP GO:0006778 porphyrin-containing compound metabolic process IEP Predicted GO
BP GO:0006779 porphyrin-containing compound biosynthetic process IEP Predicted GO
BP GO:0006783 heme biosynthetic process IEP Predicted GO
BP GO:0008150 biological_process IEP Predicted GO
BP GO:0008152 metabolic process IEP Predicted GO
MF GO:0008270 zinc ion binding IEP Predicted GO
BP GO:0009058 biosynthetic process IEP Predicted GO
BP GO:0009059 macromolecule biosynthetic process IEP Predicted GO
BP GO:0009064 glutamine family amino acid metabolic process IEP Predicted GO
BP GO:0009084 glutamine family amino acid biosynthetic process IEP Predicted GO
BP GO:0009141 nucleoside triphosphate metabolic process IEP Predicted GO
BP GO:0009143 nucleoside triphosphate catabolic process IEP Predicted GO
BP GO:0009889 regulation of biosynthetic process IEP Predicted GO
BP GO:0010468 regulation of gene expression IEP Predicted GO
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Predicted GO
MF GO:0016211 ammonia ligase activity IEP Predicted GO
MF GO:0016462 pyrophosphatase activity IEP Predicted GO
MF GO:0016717 oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water IEP Predicted GO
MF GO:0016787 hydrolase activity IEP Predicted GO
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Predicted GO
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Predicted GO
MF GO:0016880 acid-ammonia (or amide) ligase activity IEP Predicted GO
MF GO:0016987 sigma factor activity IEP Predicted GO
BP GO:0017004 cytochrome complex assembly IEP Predicted GO
MF GO:0017111 nucleoside-triphosphatase activity IEP Predicted GO
BP GO:0018130 heterocycle biosynthetic process IEP Predicted GO
MF GO:0019001 guanyl nucleotide binding IEP Predicted GO
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Predicted GO
BP GO:0019222 regulation of metabolic process IEP Predicted GO
BP GO:0019438 aromatic compound biosynthetic process IEP Predicted GO
BP GO:0031323 regulation of cellular metabolic process IEP Predicted GO
BP GO:0031326 regulation of cellular biosynthetic process IEP Predicted GO
MF GO:0032549 ribonucleoside binding IEP Predicted GO
MF GO:0032550 purine ribonucleoside binding IEP Predicted GO
MF GO:0032561 guanyl ribonucleotide binding IEP Predicted GO
BP GO:0034641 cellular nitrogen compound metabolic process IEP Predicted GO
BP GO:0034645 cellular macromolecule biosynthetic process IEP Predicted GO
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP Predicted GO
BP GO:0042168 heme metabolic process IEP Predicted GO
BP GO:0042440 pigment metabolic process IEP Predicted GO
MF GO:0043169 cation binding IEP Predicted GO
CC GO:0043226 organelle IEP Predicted GO
CC GO:0043229 intracellular organelle IEP Predicted GO
MF GO:0043565 sequence-specific DNA binding IEP Predicted GO
BP GO:0044249 cellular biosynthetic process IEP Predicted GO
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Predicted GO
BP GO:0046148 pigment biosynthetic process IEP Predicted GO
MF GO:0046872 metal ion binding IEP Predicted GO
MF GO:0046914 transition metal ion binding IEP Predicted GO
MF GO:0046933 proton-transporting ATP synthase activity, rotational mechanism IEP Predicted GO
MF GO:0047429 nucleoside-triphosphate diphosphatase activity IEP Predicted GO
MF GO:0048037 cofactor binding IEP Predicted GO
MF GO:0051087 chaperone binding IEP Predicted GO
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Predicted GO
BP GO:0051252 regulation of RNA metabolic process IEP Predicted GO
MF GO:0051536 iron-sulfur cluster binding IEP Predicted GO
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP Predicted GO
MF GO:0051540 metal cluster binding IEP Predicted GO
BP GO:0055114 oxidation-reduction process IEP Predicted GO
BP GO:0060255 regulation of macromolecule metabolic process IEP Predicted GO
MF GO:0060590 ATPase regulator activity IEP Predicted GO
BP GO:0071704 organic substance metabolic process IEP Predicted GO
BP GO:0080090 regulation of primary metabolic process IEP Predicted GO
BP GO:1901362 organic cyclic compound biosynthetic process IEP Predicted GO
BP GO:1901566 organonitrogen compound biosynthetic process IEP Predicted GO
BP GO:1901576 organic substance biosynthetic process IEP Predicted GO
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Predicted GO
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Predicted GO
BP GO:2001141 regulation of RNA biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR002423 Cpn60/TCP-1 88 590
No external refs found!