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  5. Pp1s172_78V6

Pp1s172_78V6


Description : amp-dependent synthetase and ligase


Gene families : OG_42_0004318 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0004318_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Physcomitrella release: Pp1s172_78V6
Cluster HCCA clusters: Cluster_23

Target Alias Description ECC score Gene Family Method Actions
HORVU5Hr1G120920.9 No alias medium-chain acyl-ACP synthetase 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0005507 copper ion binding IEP Predicted GO
CC GO:0005694 chromosome IEP Predicted GO
MF GO:0008131 primary amine oxidase activity IEP Predicted GO
MF GO:0008375 acetylglucosaminyltransferase activity IEP Predicted GO
BP GO:0009308 amine metabolic process IEP Predicted GO
MF GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors IEP Predicted GO
MF GO:0016641 oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor IEP Predicted GO
MF GO:0043167 ion binding IEP Predicted GO
MF GO:0043169 cation binding IEP Predicted GO
MF GO:0046872 metal ion binding IEP Predicted GO
MF GO:0048038 quinone binding IEP Predicted GO
BP GO:0051276 chromosome organization IEP Predicted GO
InterPro domains Description Start Stop
IPR000873 AMP-dep_Synth/Lig 97 599
No external refs found!