1. Home
  2. Species
  3. Physcomitrella patens
  4. Sequence
  5. Pp1s177_129V6

Pp1s177_129V6


Description : dead (asp-glu-ala-asp) box polypeptide 51


Gene families : OG_42_0003744 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0003744_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Physcomitrella release: Pp1s177_129V6
Cluster HCCA clusters: Cluster_209

Target Alias Description ECC score Gene Family Method Actions
Mp3g20650.1 No alias DEAD-box ATP-dependent RNA helicase 1 OS=Arabidopsis... 0.02 Orthogroups_2024-Update
Mp4g13510.1 No alias no hits & (original description: none) 0.02 Orthogroups_2024-Update
MpVg00890.2 No alias No annotation 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA InterProScan predictions
MF GO:0005524 ATP binding IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004177 aminopeptidase activity IEP Predicted GO
MF GO:0004222 metalloendopeptidase activity IEP Predicted GO
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEP Predicted GO
BP GO:0006413 translational initiation IEP Predicted GO
BP GO:0006508 proteolysis IEP Predicted GO
MF GO:0008107 galactoside 2-alpha-L-fucosyltransferase activity IEP Predicted GO
MF GO:0008233 peptidase activity IEP Predicted GO
MF GO:0008237 metallopeptidase activity IEP Predicted GO
MF GO:0008270 zinc ion binding IEP Predicted GO
MF GO:0008417 fucosyltransferase activity IEP Predicted GO
MF GO:0008483 transaminase activity IEP Predicted GO
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP Predicted GO
MF GO:0017056 structural constituent of nuclear pore IEP Predicted GO
MF GO:0031127 alpha-(1,2)-fucosyltransferase activity IEP Predicted GO
MF GO:0031369 translation initiation factor binding IEP Predicted GO
MF GO:0042393 histone binding IEP Predicted GO
BP GO:0042546 cell wall biogenesis IEP Predicted GO
BP GO:0044085 cellular component biogenesis IEP Predicted GO
MF GO:0070011 peptidase activity, acting on L-amino acid peptides IEP Predicted GO
InterPro domains Description Start Stop
IPR011545 DEAD/DEAH_box_helicase_dom 79 310
IPR001650 Helicase_C 349 461
No external refs found!