1. Home
  2. Species
  3. Solanum lycopersicum
  4. Sequence
  5. Solyc01g098340

Solyc01g098340


Description : DnaJ domain-containing protein (AHRD V3.3 *** A0A103XK41_CYNCS)


Gene families : OG_42_0000250 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000250_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc01g098340
Cluster HCCA clusters: Cluster_180

Target Alias Description ECC score Gene Family Method Actions
Glyma.14G161200 No alias DNAJ heat shock N-terminal domain-containing protein 0.03 Orthogroups_2024-Update
Glyma.19G239700 No alias DNAJ heat shock N-terminal domain-containing protein 0.03 Orthogroups_2024-Update
Potri.012G098800 No alias DNAJ heat shock N-terminal domain-containing protein 0.03 Orthogroups_2024-Update
Sobic.005G163100.1 No alias Unknown function 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000159 protein phosphatase type 2A complex IEP Predicted GO
MF GO:0003690 double-stranded DNA binding IEP Predicted GO
MF GO:0005048 signal sequence binding IEP Predicted GO
MF GO:0005515 protein binding IEP Predicted GO
CC GO:0005856 cytoskeleton IEP Predicted GO
BP GO:0006298 mismatch repair IEP Predicted GO
BP GO:0006487 protein N-linked glycosylation IEP Predicted GO
BP GO:0006612 protein targeting to membrane IEP Predicted GO
BP GO:0006613 cotranslational protein targeting to membrane IEP Predicted GO
BP GO:0006614 SRP-dependent cotranslational protein targeting to membrane IEP Predicted GO
BP GO:0006621 protein retention in ER lumen IEP Predicted GO
BP GO:0006886 intracellular protein transport IEP Predicted GO
BP GO:0007034 vacuolar transport IEP Predicted GO
CC GO:0008250 oligosaccharyltransferase complex IEP Predicted GO
CC GO:0008287 protein serine/threonine phosphatase complex IEP Predicted GO
MF GO:0008312 7S RNA binding IEP Predicted GO
MF GO:0016787 hydrolase activity IEP Predicted GO
MF GO:0016843 amine-lyase activity IEP Predicted GO
MF GO:0016844 strictosidine synthase activity IEP Predicted GO
MF GO:0019208 phosphatase regulator activity IEP Predicted GO
MF GO:0019888 protein phosphatase regulator activity IEP Predicted GO
MF GO:0030983 mismatched DNA binding IEP Predicted GO
BP GO:0032507 maintenance of protein location in cell IEP Predicted GO
MF GO:0032947 protein-containing complex scaffold activity IEP Predicted GO
CC GO:0033179 proton-transporting V-type ATPase, V0 domain IEP Predicted GO
BP GO:0035437 maintenance of protein localization in endoplasmic reticulum IEP Predicted GO
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Predicted GO
MF GO:0042277 peptide binding IEP Predicted GO
BP GO:0043248 proteasome assembly IEP Predicted GO
BP GO:0045047 protein targeting to ER IEP Predicted GO
BP GO:0045185 maintenance of protein location IEP Predicted GO
MF GO:0046923 ER retention sequence binding IEP Predicted GO
CC GO:0048500 signal recognition particle IEP Predicted GO
BP GO:0051235 maintenance of location IEP Predicted GO
BP GO:0051651 maintenance of location in cell IEP Predicted GO
BP GO:0070972 protein localization to endoplasmic reticulum IEP Predicted GO
BP GO:0072595 maintenance of protein localization in organelle IEP Predicted GO
BP GO:0072599 establishment of protein localization to endoplasmic reticulum IEP Predicted GO
MF GO:0140096 catalytic activity, acting on a protein IEP Predicted GO
CC GO:1902494 catalytic complex IEP Predicted GO
CC GO:1903293 phosphatase complex IEP Predicted GO
InterPro domains Description Start Stop
IPR024593 DUF3444 225 431
IPR024593 DUF3444 597 781
No external refs found!