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Description : xyloglucan 6-
Gene families : OG_42_0000333 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000333_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Physcomitrella release: Pp1s17_404V6 | |
| Cluster | HCCA clusters: Cluster_310 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Bradi1g64560 | No alias | xylosyltransferase 1 | 0.03 | Orthogroups_2024-Update | |
| GRMZM2G445201 | No alias | Galactosyl transferase GMA12/MNN10 family protein | 0.01 | Orthogroups_2024-Update | |
| Glyma.15G148000 | No alias | UDP-xylosyltransferase 2 | 0.02 | Orthogroups_2024-Update | |
| MA_53390g0010 | No alias | (at4g37690 : 419.0) Galactosyl transferase GMA12/MNN10... | 0.01 | Orthogroups_2024-Update | |
| Pp1s74_206V6 | No alias | xyloglucan 6- | 0.01 | Orthogroups_2024-Update | |
| Seita.9G435600.1 | No alias | 1,6-alpha-xylosyltransferase *(XXT) | 0.02 | Orthogroups_2024-Update | |
| Solyc03g115740 | No alias | Xyloglucan alpha-1,6-xylosyltransferase (AHRD V3.3 ***... | 0.02 | Orthogroups_2024-Update |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0016021 | integral component of membrane | IEA | InterProScan predictions |
| MF | GO:0016757 | transferase activity, transferring glycosyl groups | IEA | InterProScan predictions |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0001522 | pseudouridine synthesis | IEP | Predicted GO |
| BP | GO:0006355 | regulation of transcription, DNA-templated | IEP | Predicted GO |
| BP | GO:0009451 | RNA modification | IEP | Predicted GO |
| BP | GO:0009889 | regulation of biosynthetic process | IEP | Predicted GO |
| MF | GO:0009982 | pseudouridine synthase activity | IEP | Predicted GO |
| BP | GO:0010468 | regulation of gene expression | IEP | Predicted GO |
| BP | GO:0010556 | regulation of macromolecule biosynthetic process | IEP | Predicted GO |
| MF | GO:0016853 | isomerase activity | IEP | Predicted GO |
| MF | GO:0016866 | intramolecular transferase activity | IEP | Predicted GO |
| BP | GO:0019219 | regulation of nucleobase-containing compound metabolic process | IEP | Predicted GO |
| BP | GO:0019222 | regulation of metabolic process | IEP | Predicted GO |
| BP | GO:0031323 | regulation of cellular metabolic process | IEP | Predicted GO |
| BP | GO:0031326 | regulation of cellular biosynthetic process | IEP | Predicted GO |
| MF | GO:0043565 | sequence-specific DNA binding | IEP | Predicted GO |
| BP | GO:0050789 | regulation of biological process | IEP | Predicted GO |
| BP | GO:0050794 | regulation of cellular process | IEP | Predicted GO |
| BP | GO:0051171 | regulation of nitrogen compound metabolic process | IEP | Predicted GO |
| BP | GO:0051252 | regulation of RNA metabolic process | IEP | Predicted GO |
| BP | GO:0060255 | regulation of macromolecule metabolic process | IEP | Predicted GO |
| BP | GO:0065007 | biological regulation | IEP | Predicted GO |
| BP | GO:0080090 | regulation of primary metabolic process | IEP | Predicted GO |
| BP | GO:1903506 | regulation of nucleic acid-templated transcription | IEP | Predicted GO |
| BP | GO:2000112 | regulation of cellular macromolecule biosynthetic process | IEP | Predicted GO |
| BP | GO:2001141 | regulation of RNA biosynthetic process | IEP | Predicted GO |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR008630 | Glyco_trans_34 | 133 | 370 |
| No external refs found! |