1. Home
  2. Species
  3. Physcomitrella patens
  4. Sequence
  5. Pp1s183_67V6

Pp1s183_67V6


Description : transparent testa 12


Gene families : OG_42_0000106 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000106_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Physcomitrella release: Pp1s183_67V6
Cluster HCCA clusters: Cluster_92

Target Alias Description ECC score Gene Family Method Actions
Bradi3g22880 No alias MATE efflux family protein 0.02 Orthogroups_2024-Update
Cre10.g444900 No alias MATE efflux family protein 0.01 Orthogroups_2024-Update
Glyma.15G107100 No alias MATE efflux family protein 0.02 Orthogroups_2024-Update
HORVU0Hr1G039670.2 No alias metabolite transporter *(DTX) 0.02 Orthogroups_2024-Update
HORVU1Hr1G003490.2 No alias metabolite transporter *(DTX) 0.02 Orthogroups_2024-Update
HORVU6Hr1G084080.3 No alias metabolite transporter *(DTX) 0.02 Orthogroups_2024-Update
LOC_Os07g31884 No alias MATE efflux family protein, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os10g20350 No alias MATE efflux family protein, putative, expressed 0.02 Orthogroups_2024-Update
MA_10434918g0010 No alias (at5g52450 : 483.0) MATE efflux family protein;... 0.03 Orthogroups_2024-Update
Mp3g05110.1 No alias metabolite transporter (DTX) 0.04 Orthogroups_2024-Update
Mp4g18470.1 No alias metabolite transporter (DTX) 0.06 Orthogroups_2024-Update
Mp6g02120.1 No alias metabolite transporter (DTX) 0.03 Orthogroups_2024-Update
Mp7g12320.1 No alias metabolite transporter (DTX) 0.04 Orthogroups_2024-Update
Pp1s147_3V6 No alias transparent testa 12 0.03 Orthogroups_2024-Update
Pp1s70_39V6 No alias transparent testa 12 0.02 Orthogroups_2024-Update
Seita.8G203400.1 No alias metabolite transporter *(DTX) 0.02 Orthogroups_2024-Update
Sobic.003G260200.1 No alias metabolite transporter *(DTX) 0.02 Orthogroups_2024-Update
Solyc04g007540 No alias Protein DETOXIFICATION (AHRD V3.3 *** K4BNR1_SOLLC) 0.03 Orthogroups_2024-Update
Sopen03g031350 No alias MatE 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0006855 drug transmembrane transport IEA InterProScan predictions
MF GO:0015238 drug transmembrane transporter activity IEA InterProScan predictions
MF GO:0015297 antiporter activity IEA InterProScan predictions
CC GO:0016020 membrane IEA InterProScan predictions
BP GO:0055085 transmembrane transport IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source
MF GO:0005506 iron ion binding IEP Predicted GO
BP GO:0006486 protein glycosylation IEP Predicted GO
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Predicted GO
BP GO:0043413 macromolecule glycosylation IEP Predicted GO
MF GO:0046914 transition metal ion binding IEP Predicted GO
InterPro domains Description Start Stop
IPR002528 MATE_fam 285 446
IPR002528 MATE_fam 64 224
No external refs found!