1. Home
  2. Species
  3. Physcomitrella patens
  4. Sequence
  5. Pp1s185_110V6

Pp1s185_110V6


Description : photosystem ii reaction center w chloroplast


Gene families : OG_42_0003970 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0003970_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Physcomitrella release: Pp1s185_110V6
Cluster HCCA clusters: Cluster_101

Target Alias Description ECC score Gene Family Method Actions
A4A49_05181 No alias photosystem ii reaction center w protein, chloroplastic 0.17 Orthogroups_2024-Update
A4A49_19163 No alias photosystem ii reaction center w protein, chloroplastic 0.07 Orthogroups_2024-Update
At2g30570 No alias PSBW [Source:UniProtKB/TrEMBL;Acc:A0A178VQ32] 0.02 Orthogroups_2024-Update
Bradi2g20380 No alias photosystem II reaction center W 0.08 Orthogroups_2024-Update
Brara.D01828.1 No alias component *(PsbW) of PS-II complex 0.17 Orthogroups_2024-Update
Brara.E01277.1 No alias component *(PsbW) of PS-II complex 0.07 Orthogroups_2024-Update
Glyma.02G141700 No alias photosystem II reaction center W 0.21 Orthogroups_2024-Update
Glyma.03G159100 No alias photosystem II reaction center W 0.11 Orthogroups_2024-Update
Glyma.10G032200 No alias photosystem II reaction center W 0.1 Orthogroups_2024-Update
Glyma.19G161400 No alias photosystem II reaction center W 0.08 Orthogroups_2024-Update
HORVU1Hr1G078140.4 No alias component *(PsbW) of PS-II complex 0.09 Orthogroups_2024-Update
HORVU3Hr1G075870.1 No alias component *(PsbW) of PS-II complex 0.04 Orthogroups_2024-Update
Kfl00638_0030 kfl00638_0030_v1.1 no hits & (original description: no original description) 0.11 Orthogroups_2024-Update
LOC_Os01g56680 No alias photosystem II reaction center W protein, chloroplast... 0.02 Orthogroups_2024-Update
LOC_Os05g43310 No alias photosystem II reaction center W protein, chloroplast... 0.04 Orthogroups_2024-Update
Mp5g14190.1 No alias component PsbW of PS-II complex 0.17 Orthogroups_2024-Update
PSME_00010732-RA No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update
Seita.3G184900.1 No alias component *(PsbW) of PS-II complex 0.13 Orthogroups_2024-Update
Seita.5G336700.1 No alias component *(PsbW) of PS-II complex 0.14 Orthogroups_2024-Update
Sobic.003G313000.1 No alias component *(PsbW) of PS-II complex 0.15 Orthogroups_2024-Update
Sobic.009G191300.1 No alias component *(PsbW) of PS-II complex 0.08 Orthogroups_2024-Update
Solyc06g084050 No alias LOW QUALITY:isochorismate synthase 2 (AHRD V3.3 --* AT1G18870.2) 0.02 Orthogroups_2024-Update
Solyc09g065910 No alias photosystem II reaction center W (AHRD V3.3 *** AT2G30570.1) 0.11 Orthogroups_2024-Update
Sopen06g035440 No alias Photosystem II reaction centre W protein (PsbW) 0.11 Orthogroups_2024-Update
Sopen09g027700 No alias Photosystem II reaction centre W protein (PsbW) 0.05 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0009507 chloroplast IEA InterProScan predictions
CC GO:0009523 photosystem II IEA InterProScan predictions
BP GO:0015979 photosynthesis IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004497 monooxygenase activity IEP Predicted GO
MF GO:0005509 calcium ion binding IEP Predicted GO
MF GO:0008565 protein transporter activity IEP Predicted GO
MF GO:0008883 glutamyl-tRNA reductase activity IEP Predicted GO
CC GO:0009522 photosystem I IEP Predicted GO
CC GO:0009538 photosystem I reaction center IEP Predicted GO
CC GO:0009654 photosystem II oxygen evolving complex IEP Predicted GO
BP GO:0010109 regulation of photosynthesis IEP Predicted GO
BP GO:0010207 photosystem II assembly IEP Predicted GO
MF GO:0010242 oxygen evolving activity IEP Predicted GO
MF GO:0010277 chlorophyllide a oxygenase [overall] activity IEP Predicted GO
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP Predicted GO
MF GO:0016703 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases) IEP Predicted GO
MF GO:0019829 cation-transporting ATPase activity IEP Predicted GO
CC GO:0019898 extrinsic component of membrane IEP Predicted GO
MF GO:0022853 active ion transmembrane transporter activity IEP Predicted GO
BP GO:0033014 tetrapyrrole biosynthetic process IEP Predicted GO
BP GO:0042548 regulation of photosynthesis, light reaction IEP Predicted GO
BP GO:0042549 photosystem II stabilization IEP Predicted GO
MF GO:0042625 ATPase coupled ion transmembrane transporter activity IEP Predicted GO
MF GO:0043169 cation binding IEP Predicted GO
BP GO:0043467 regulation of generation of precursor metabolites and energy IEP Predicted GO
MF GO:0044769 ATPase activity, coupled to transmembrane movement of ions, rotational mechanism IEP Predicted GO
MF GO:0046872 metal ion binding IEP Predicted GO
MF GO:0046933 proton-transporting ATP synthase activity, rotational mechanism IEP Predicted GO
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP Predicted GO
CC GO:1902494 catalytic complex IEP Predicted GO
CC GO:1990204 oxidoreductase complex IEP Predicted GO
InterPro domains Description Start Stop
IPR009806 PSII_PsbW_class2 6 137
No external refs found!