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  5. Pp1s189_29V6

Pp1s189_29V6


Description : myb55 (myb domain protein 55) dna binding transcription factor


Gene families : OG_42_0000002 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Physcomitrella release: Pp1s189_29V6
Cluster HCCA clusters: Cluster_214

Target Alias Description ECC score Gene Family Method Actions
A4A49_00243 No alias transcription factor myb39 0.03 Orthogroups_2024-Update
A4A49_16262 No alias transcription factor myb39 0.03 Orthogroups_2024-Update
A4A49_33530 No alias transcription factor myb26 0.02 Orthogroups_2024-Update
A4A49_41919 No alias myb-related protein myb4 0.02 Orthogroups_2024-Update
At2g31180 No alias Transcription factor MYB14... 0.02 Orthogroups_2024-Update
At3g06490 No alias Transcription factor MYB108... 0.02 Orthogroups_2024-Update
At3g48920 No alias MYB transcription factor [Source:UniProtKB/TrEMBL;Acc:Q9SMT1] 0.03 Orthogroups_2024-Update
At3g49690 No alias RAX3 [Source:UniProtKB/TrEMBL;Acc:A0A178VK29] 0.03 Orthogroups_2024-Update
At5g49620 No alias myb domain protein 78 [Source:TAIR;Acc:AT5G49620] 0.03 Orthogroups_2024-Update
At5g52260 No alias MYB transcription factor [Source:UniProtKB/TrEMBL;Acc:Q9LTJ5] 0.02 Orthogroups_2024-Update
Bradi2g47590 No alias myb domain protein 86 0.03 Orthogroups_2024-Update
Bradi4g41277 No alias myb domain protein 4 0.02 Orthogroups_2024-Update
Bradi5g13041 No alias myb domain protein 103 0.02 Orthogroups_2024-Update
Brara.A03407.1 No alias MYB class-R2R3 subgroup-18 transcription factor 0.03 Orthogroups_2024-Update
Brara.B01492.1 No alias MYB class-R2R3 transcription factor 0.04 Orthogroups_2024-Update
Brara.E03665.1 No alias MYB class-R2R3 subgroup-19/20 transcription factor 0.03 Orthogroups_2024-Update
Brara.G01913.1 No alias accessory protein (LMI2) of floral meristem identity control 0.04 Orthogroups_2024-Update
Brara.K00319.1 No alias MYB class-R2R3 subgroup-4 transcription factor 0.03 Orthogroups_2024-Update
GRMZM2G013581 No alias myb domain protein 48 0.04 Orthogroups_2024-Update
GRMZM2G047600 No alias myb domain protein 112 0.03 Orthogroups_2024-Update
GRMZM2G097636 No alias myb domain protein 63 0.03 Orthogroups_2024-Update
GRMZM2G167088 No alias myb domain protein 101 0.03 Orthogroups_2024-Update
GRMZM2G325907 No alias myb domain protein 103 0.02 Orthogroups_2024-Update
Glyma.02G110000 No alias myb domain protein 16 0.03 Orthogroups_2024-Update
Glyma.02G110100 No alias myb domain protein 106 0.03 Orthogroups_2024-Update
Glyma.06G160500 No alias myb domain protein 4 0.02 Orthogroups_2024-Update
Glyma.06G188400 No alias Duplicated homeodomain-like superfamily protein 0.03 Orthogroups_2024-Update
Glyma.09G235600 No alias myb domain protein 106 0.04 Orthogroups_2024-Update
Glyma.10G132200 No alias myb domain protein 79 0.03 Orthogroups_2024-Update
Glyma.11G107100 No alias myb domain protein 4 0.04 Orthogroups_2024-Update
Glyma.16G007100 No alias myb domain protein 6 0.02 Orthogroups_2024-Update
Glyma.16G007200 No alias myb domain protein 4 0.02 Orthogroups_2024-Update
Glyma.16G073000 No alias myb domain protein 21 0.02 Orthogroups_2024-Update
Glyma.19G022100 No alias myb domain protein 30 0.05 Orthogroups_2024-Update
HORVU2Hr1G120340.2 No alias MYB class-R2R3 subgroup-8 transcription factor 0.02 Orthogroups_2024-Update
HORVU3Hr1G056980.2 No alias Unknown function 0.02 Orthogroups_2024-Update
HORVU3Hr1G082210.1 No alias MYB class-R2R3 subgroup-4 transcription factor 0.02 Orthogroups_2024-Update
HORVU4Hr1G082610.1 No alias Unknown function 0.02 Orthogroups_2024-Update
HORVU5Hr1G021750.2 No alias MYB class-R2R3 transcription factor 0.02 Orthogroups_2024-Update
HORVU5Hr1G022690.5 No alias MYB class-R2R3 subgroup-19/20 transcription factor 0.02 Orthogroups_2024-Update
HORVU6Hr1G060610.3 No alias MYB class-R2R3 subgroup-16 transcription factor &... 0.02 Orthogroups_2024-Update
HORVU7Hr1G041810.5 No alias MYB class-R2R3 transcription factor 0.03 Orthogroups_2024-Update
LOC_Os06g11780 No alias MYB family transcription factor, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os11g47460 No alias MYB family transcription factor, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os12g37970 No alias MYB family transcription factor, putative, expressed 0.03 Orthogroups_2024-Update
MA_10430220g0010 No alias (at3g23250 : 216.0) Member of the R2R3 factor gene... 0.02 Orthogroups_2024-Update
MA_10434028g0010 No alias (at1g68320 : 180.0) putative transcription factor:... 0.02 Orthogroups_2024-Update
MA_1589g0010 No alias (at1g63910 : 241.0) member of MYB3R- and R2R3- type MYB-... 0.02 Orthogroups_2024-Update
PSME_00019912-RA No alias (at5g49620 : 209.0) Member of the R2R3 factor gene... 0.02 Orthogroups_2024-Update
PSME_00020880-RA No alias (at1g66230 : 247.0) Encodes a putative transcription... 0.02 Orthogroups_2024-Update
PSME_00033098-RA No alias (at3g24310 : 169.0) snapdragon myb protein 305 homolog... 0.03 Orthogroups_2024-Update
PSME_00035013-RA No alias (at4g38620 : 257.0) Encodes a R2R3 MYB protein which is... 0.03 Orthogroups_2024-Update
PSME_00035672-RA No alias (at1g22640 : 238.0) MYB-type transcription factor (MYB3)... 0.04 Orthogroups_2024-Update
PSME_00049306-RA No alias (at5g15310 : 258.0) Member of the R2R3 factor gene... 0.03 Orthogroups_2024-Update
PSME_00050866-RA No alias (at1g22640 : 150.0) MYB-type transcription factor (MYB3)... 0.03 Orthogroups_2024-Update
Potri.005G164900 No alias myb domain protein 93 0.02 Orthogroups_2024-Update
Potri.005G224100 No alias myb domain protein 15 0.02 Orthogroups_2024-Update
Potri.008G180800 No alias myb domain protein 40 0.02 Orthogroups_2024-Update
Potri.009G134000 No alias myb domain protein 4 0.03 Orthogroups_2024-Update
Potri.010G165700 No alias myb domain protein 106 0.02 Orthogroups_2024-Update
Potri.014G100800 No alias myb domain protein 7 0.04 Orthogroups_2024-Update
Pp1s238_71V6 No alias K16F4.6; myb family transcription factor [Arabidopsis thaliana] 0.04 Orthogroups_2024-Update
Pp1s389_40V6 No alias Myb-related protein Myb4 (OsMyb4) (Transcription factor... 0.03 Orthogroups_2024-Update
Seita.2G320600.1 No alias MYB class-R2R3 subgroup-13 transcription factor 0.03 Orthogroups_2024-Update
Seita.7G179600.1 No alias regulatory protein *(LAF1) of phytochrome signalling... 0.02 Orthogroups_2024-Update
Seita.7G284900.1 No alias MYB class-R2R3 subgroup-4 transcription factor 0.03 Orthogroups_2024-Update
Sobic.003G270300.1 No alias MYB class-R2R3 subgroup-13 transcription factor 0.03 Orthogroups_2024-Update
Solyc06g005310 No alias MYB transcription factor 0.03 Orthogroups_2024-Update
Solyc10g044680 No alias R2R3MYB transcription factor 55 0.03 Orthogroups_2024-Update
Sopen01g001670 No alias Myb-like DNA-binding domain 0.03 Orthogroups_2024-Update
Sopen03g001570 No alias Myb-like DNA-binding domain 0.02 Orthogroups_2024-Update
Sopen11g029710 No alias Myb-like DNA-binding domain 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Predicted GO
MF GO:0010309 acireductone dioxygenase [iron(II)-requiring] activity IEP Predicted GO
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP Predicted GO
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP Predicted GO
MF GO:0051213 dioxygenase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR001005 SANT/Myb 67 110
IPR001005 SANT/Myb 14 61
No external refs found!