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  5. Pp1s18_235V6

Pp1s18_235V6


Description : mre11 dna repair recombination protein


Gene families : OG_42_0004505 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0004505_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Physcomitrella release: Pp1s18_235V6
Cluster HCCA clusters: Cluster_269

Target Alias Description ECC score Gene Family Method Actions
Brara.J00906.1 No alias component *(MRE11) of MRE11-RAD50-NBS1 (MRN) complex &... 0.04 Orthogroups_2024-Update
Cre12.g556911 No alias DNA repair and meiosis protein (Mre11) 0.01 Orthogroups_2024-Update
evm.model.contig_816.1 No alias (at5g54260 : 138.0) DNA repair and meiotic recombination... 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0004519 endonuclease activity IEA InterProScan predictions
CC GO:0005634 nucleus IEA InterProScan predictions
BP GO:0006302 double-strand break repair IEA InterProScan predictions
MF GO:0016787 hydrolase activity IEA InterProScan predictions
MF GO:0030145 manganese ion binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0004672 protein kinase activity IEP Predicted GO
MF GO:0004674 protein serine/threonine kinase activity IEP Predicted GO
MF GO:0005524 ATP binding IEP Predicted GO
MF GO:0008144 drug binding IEP Predicted GO
MF GO:0016301 kinase activity IEP Predicted GO
MF GO:0016740 transferase activity IEP Predicted GO
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Predicted GO
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Predicted GO
MF GO:0030554 adenyl nucleotide binding IEP Predicted GO
MF GO:0032559 adenyl ribonucleotide binding IEP Predicted GO
MF GO:0035299 inositol pentakisphosphate 2-kinase activity IEP Predicted GO
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Predicted GO
MF GO:0140096 catalytic activity, acting on a protein IEP Predicted GO
InterPro domains Description Start Stop
IPR004843 Calcineurin-like_PHP_ApaH 20 264
IPR007281 Mre11_DNA-bd 309 461
No external refs found!