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  5. Pp1s18_64V6

Pp1s18_64V6


No description available


Gene families : OG_42_0000027 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000027_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Physcomitrella release: Pp1s18_64V6
Cluster HCCA clusters: Cluster_65

Target Alias Description ECC score Gene Family Method Actions
At1g21340 No alias Dof zinc finger protein DOF1.2... 0.02 Orthogroups_2024-Update
Brara.B03961.1 No alias transcription factor *(DOF) 0.03 Orthogroups_2024-Update
Brara.D00404.1 No alias transcription factor *(DOF) 0.02 Orthogroups_2024-Update
Brara.E02083.1 No alias transcription factor *(DOF) 0.02 Orthogroups_2024-Update
Brara.G02475.1 No alias transcription factor *(DOF) 0.02 Orthogroups_2024-Update
Brara.I00873.1 No alias transcription factor *(DOF) 0.03 Orthogroups_2024-Update
Brara.I03146.1 No alias transcription factor *(DOF) 0.03 Orthogroups_2024-Update
Brara.I03787.1 No alias transcription factor *(DOF) 0.04 Orthogroups_2024-Update
Brara.K00739.1 No alias transcription factor *(DOF) 0.04 Orthogroups_2024-Update
Glyma.04G233300 No alias Dof-type zinc finger DNA-binding family protein 0.04 Orthogroups_2024-Update
Glyma.08G358100 No alias DNA binding with one finger 2.4 0.03 Orthogroups_2024-Update
Glyma.11G059300 No alias Dof-type zinc finger DNA-binding family protein 0.03 Orthogroups_2024-Update
Glyma.19G118000 No alias cycling DOF factor 3 0.02 Orthogroups_2024-Update
Glyma.19G257500 No alias Dof-type zinc finger DNA-binding family protein 0.04 Orthogroups_2024-Update
Glyma.20G035200 No alias cycling DOF factor 2 0.02 Orthogroups_2024-Update
Glyma.20G216600 No alias Dof-type zinc finger DNA-binding family protein 0.02 Orthogroups_2024-Update
MA_459791g0010 No alias (at1g28310 : 129.0) Dof-type zinc finger DNA-binding... 0.01 Orthogroups_2024-Update
MA_74014g0010 No alias (at5g65590 : 133.0) Dof-type zinc finger DNA-binding... 0.01 Orthogroups_2024-Update
Potri.006G202500 No alias Dof-type zinc finger DNA-binding family protein 0.02 Orthogroups_2024-Update
Potri.012G081300 No alias Dof-type zinc finger DNA-binding family protein 0.02 Orthogroups_2024-Update
Potri.019G040700 No alias cycling DOF factor 3 0.01 Orthogroups_2024-Update
Solyc02g090220 No alias Zinc finger, Dof-type (AHRD V3.3 *** A0A124SC40_CYNCS) 0.08 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004175 endopeptidase activity IEP Predicted GO
MF GO:0004298 threonine-type endopeptidase activity IEP Predicted GO
CC GO:0005839 proteasome core complex IEP Predicted GO
BP GO:0006508 proteolysis IEP Predicted GO
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP Predicted GO
BP GO:0006807 nitrogen compound metabolic process IEP Predicted GO
BP GO:0009056 catabolic process IEP Predicted GO
BP GO:0009057 macromolecule catabolic process IEP Predicted GO
BP GO:0019538 protein metabolic process IEP Predicted GO
CC GO:0019773 proteasome core complex, alpha-subunit complex IEP Predicted GO
BP GO:0019941 modification-dependent protein catabolic process IEP Predicted GO
BP GO:0043170 macromolecule metabolic process IEP Predicted GO
MF GO:0043531 ADP binding IEP Predicted GO
BP GO:0043632 modification-dependent macromolecule catabolic process IEP Predicted GO
BP GO:0044237 cellular metabolic process IEP Predicted GO
BP GO:0044248 cellular catabolic process IEP Predicted GO
BP GO:0044260 cellular macromolecule metabolic process IEP Predicted GO
BP GO:0044265 cellular macromolecule catabolic process IEP Predicted GO
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEP Predicted GO
MF GO:0070003 threonine-type peptidase activity IEP Predicted GO
BP GO:1901564 organonitrogen compound metabolic process IEP Predicted GO
BP GO:1901575 organic substance catabolic process IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!